1HEZ
Structure of P. magnus protein L bound to a human IgM Fab.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LURE BEAMLINE DW32 |
Synchrotron site | LURE |
Beamline | DW32 |
Temperature [K] | 120 |
Detector technology | IMAGE PLATE |
Collection date | 1999-10-15 |
Detector | MAR scanner 345 mm plate |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.185, 87.335, 210.538 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.700 |
R-factor | 0.215 |
Rwork | 0.215 |
R-free | 0.27800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dee |
RMSD bond length | 0.007 |
RMSD bond angle | 1.423 |
Data reduction software | HKL |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.780 |
High resolution limit [Å] | 2.600 * | 2.600 * |
Rmerge | 0.116 * | 0.486 * |
Number of reflections | 26811 | |
<I/σ(I)> | 12.7 | 2.9 |
Completeness [%] | 95.2 | 93.7 * |
Redundancy | 4.66 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 8.5 | used seeding * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | mPEG5000 | 13-16 (%(w/w)) | |
2 | 1 | reservoir | imidazole malate | 100 (mM) | |
3 | 1 | drop | protein | 5 (mg/ml) |