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1HCF

Crystal structure of TrkB-d5 bound to neurotrophin-4/5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX14.1
Synchrotron siteSRS
BeamlinePX14.1
Temperature [K]100
Detector technologyCCD
Collection date2001-03-15
DetectorADSC CCD
Spacegroup nameP 21 21 21
Unit cell lengths74.372, 80.406, 91.318
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.700
R-factor0.218
Rwork0.218
R-free0.26400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1B98 (NEUROTROPHIN) 1WWB (TRK)
RMSD bond length0.007
RMSD bond angle26.200

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.800
High resolution limit [Å]2.7002.700
Rmerge0.084

*

0.294

*

Number of reflections15635
<I/σ(I)>19.63.7
Completeness [%]99.299.9
Redundancy5.45.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

7.510 MG/ML COMPLEX IN 20MM TRIS, 150MM NACL, PH 7.5, 100MM HEPES PH 7.5, 1.5M LISO4
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111protein10 (mg/ml)
2121.5-1.6 (M)
312HEPES100 (mM)pH7.0-7.5

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PDB entries from 2024-05-01

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