Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1FNT

CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST IN COMPLEX WITH THE PROTEASOME ACTIVATOR PA26 FROM TRYPANOSOME BRUCEI AT 3.2 ANGSTROMS RESOLUTION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-1
Synchrotron siteSSRL
BeamlineBL9-1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2000-02-15
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths192.964, 232.127, 296.772
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 3.200
R-factor0.255
Rwork0.255
R-free0.32500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1/2 OF 20S PROTEASOME INCLUDING ALPHA-1-7 AND REMARK 200 BETA-1-7 REDUCED TO A POLY-ALANINE MODEL.
RMSD bond length0.013
RMSD bond angle23.700

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.260
High resolution limit [Å]3.2003.200
Rmerge0.1120.331
Total number of observations503540

*

Number of reflections1894956632

*

<I/σ(I)>71.9
Completeness [%]89.162.9
Redundancy2.72.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52770.1 M NaHEPES, 40% MPD, 0.2 M NaCl, pH 7.5, VAPOR DIFFUSION, SITTING DROP
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-HCl10 (mM)
21dropEDTA1 (mM)
31dropdithiothreitol1 (mM)
41dropprotein10 (mg/ml)
51reservoirsodium HEPES0.1 (M)
61reservoirMPD40 (%)
71reservoir0.2 (M)

229183

PDB entries from 2024-12-18

PDB statisticsPDBj update infoContact PDBjnumon