1DVA
Crystal Structure of the Complex Between the Peptide Exosite Inhibitor E-76 and Coagulation Factor VIIA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 1998-07-09 |
Detector | MARRESEARCH |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 70.490, 55.260, 111.730 |
Unit cell angles | 90.00, 99.48, 90.00 |
Refinement procedure
Resolution | 50.000 - 3.000 |
R-factor | 0.225 * |
Rwork | 0.225 |
R-free | 0.29500 |
RMSD bond length | 0.012 |
RMSD bond angle | 2.000 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.104 | 0.262 |
Number of reflections | 16915 | |
<I/σ(I)> | 6.2 | 2.7 |
Completeness [%] | 97.5 | 99 * |
Redundancy | 2.9 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 5.5 | 292 | PEG4000, t-butanol, sodium cacodylate, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 292K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG4000 | 20 (%(w/v)) | |
2 | 1 | reservoir | t-butanol | 10 (%) | |
3 | 1 | reservoir | sodium cacodylate | 0.1 (M) |