Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1A1J

RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]130
Detector technologyIMAGE PLATE
Collection date1995-12-15
DetectorRIGAKU RAXIS IIC
Spacegroup nameC 2 2 21
Unit cell lengths42.300, 55.900, 133.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.000
R-factor0.21
Rwork0.210
R-free0.26200
Structure solution methodISOMORPHOUS MOLECULAR REPLACEMENT
Starting model (for MR)1aay WITHOUT WATERS AND WITHOUT SIDE CHAINS FOR RESIDUES 18 - 24
RMSD bond length0.008
RMSD bond angle23.200

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.034

*

0.054

*

Total number of observations29842

*

Number of reflections9959
<I/σ(I)>39.519.4
Completeness [%]89.682.9
Redundancy3.0

*

1.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.235% PEG 3350, 200MM NACL, 25 MM MES PH 6.2, VAPOR DIFFUSION, HANGING DROP
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111NACL
211MES
311PEG 3350
412NACL
512MES
612PEG 3350
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropzinc-finger-DNA complex0.5 (mM)
21drop250 (mM)
31dropMES75 (mM)
41dropPEG335017.5 (%)
51reservoirPEG335035 (%)
61reservoir200 (mM)
71reservoirMES75 (mM)

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon