1NVP
HUMAN TFIIA/TBP/DNA COMPLEX
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
| Synchrotron site | EMBL/DESY, HAMBURG |
| Beamline | X11 |
| Temperature [K] | 110 |
| Detector technology | IMAGE PLATE |
| Collection date | 1997-03-21 |
| Detector | MARRESEARCH |
| Wavelength(s) | 0.916, 0.909 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 59.624, 90.884, 125.256 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 40.000 * - 2.100 |
| R-factor | 0.229 |
| Rwork | 0.229 |
| R-free | 0.24700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 25.100 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.000 * | 2.150 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.065 | 0.362 |
| Total number of observations | 224980 * | |
| Number of reflections | 40386 | |
| <I/σ(I)> | 25.6 | 4.1 |
| Completeness [%] | 99.8 | 99.8 |
| Redundancy | 5.6 | 3.5 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 22 * | PEG6000, lithium nitrate, calcium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 * | 22 * | PEG6000, lithium nitrate, calcium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | PEG6000 | ||
| 2 | 1 | 1 | lithium nitrate | ||
| 3 | 1 | 1 | CaCl2 | ||
| 4 | 1 | 2 | CaCl2 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 10 (mg/ml) | |
| 10 | 1 | reservoir | dithiothreitol | 1 (mM) | |
| 11 | 1 | reservoir | PEG6000 | 12 (%(w/v)) | |
| 2 | 1 | drop | Bis-Tris | 2 (mM) | pH7.0 |
| 3 | 1 | drop | 20 (mM) | ||
| 4 | 1 | drop | EDTA | 0.1 (mM) | |
| 5 | 1 | drop | dithiothreitol | 0.5 (mM) | |
| 6 | 1 | drop | 0.01 (%(w/v)) | ||
| 7 | 1 | reservoir | bis-Tris | 50 (mM) | pH6.5 |
| 8 | 1 | reservoir | 100 (mM) | ||
| 9 | 1 | reservoir | 10 (mM) |






