Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GKC

MMP9-inhibitor complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX9.6
Synchrotron siteSRS
BeamlinePX9.6
Temperature [K]298
Detector technologyCCD
Collection date1999-08-25
DetectorADSC CCD
Spacegroup nameP 41 21 2
Unit cell lengths56.005, 56.005, 262.655
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.300 - 2.300
Rwork0.207
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1hfs
RMSD bond length0.006
RMSD bond angle23.400

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareCNX (2000)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.3002.440
High resolution limit [Å]2.3002.300
Rmerge0.1170.479
Total number of observations77726

*

Number of reflections173752656

*

<I/σ(I)>14.44.2
Completeness [%]88.3

*

83.3

*

Redundancy4.54.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.515

*

THE CRYSTALLISATION DROPS CONTAINED A 1:1 MIXTURE OF PURIFIED COMPLEX SOLUTION (0.55 MG/ML PROTEIN AND 0.5 MM INHIBITOR SOLUTION CONCENTRATED TO ~4 MG/ML IN 20 MM TRIS- HCL PH 7.5, 2 MM CACL2, 50 MM NACL) AND RESERVOIR BUFFER (3.6 M NACL, 0.1 M HEPES PH 7.5).
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein0.55 (mg/ml)
21dropinhibitor0.5 (mM)
31dropTris-HCl20 (mM)pH7.5
41drop2 (mM)
51drop50 (mM)
61reservoir3.6 (M)
71reservoirHEPES0.1 (M)pH7.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon