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Updated PDB entries
1NI3
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Structure of the Schizosaccharomyces pombe YchF GTPase
Descriptor: SULFATE ION, YchF GTP-binding protein
Authors:Kniewel, R.K, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2002-12-20
Release date:2003-01-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the S. pombe YchF GTP-binding protein
To be Published
1NIK
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Wild Type RNA Polymerase II
Descriptor: DNA-directed RNA polymerase I, II and III 23 kDa polypeptide, DNA-directed RNA polymerase II, ...
Authors:Bushnell, D.A, Kornberg, R.D.
Deposit date:2002-12-24
Release date:2003-04-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Complete, 12-subunit RNA Polymerase II at 4.1-A resolution: implications for the initiation of transcription.
Proc.Natl.Acad.Sci.USA, 100, 2003
1NIT
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CRYSTAL STRUCTURE OF ACONITASE WITH TRANS-ACONITATE AND NITROCITRATE BOUND
Descriptor: ACONITASE, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Lauble, H, Kennedy, M.C, Beinert, H, Stout, C.D.
Deposit date:1993-01-17
Release date:1993-10-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of aconitase with trans-aconitate and nitrocitrate bound.
J.Mol.Biol., 237, 1994
1NIW
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Crystal structure of endothelial nitric oxide synthase peptide bound to calmodulin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Nitric-oxide synthase, ...
Authors:Aoyagi, M, Arvai, A.S, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-12-26
Release date:2003-02-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for endothelial nitric oxide synthase binding to calmodulin
Embo J., 22, 2003
1NJR
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Crystal structure of yeast ymx7, an ADP-ribose-1''-monophosphatase
Descriptor: 32.1 kDa protein in ADH3-RCA1 intergenic region, Xylitol
Authors:Kumaran, D, Eswaramoorthy, S, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-02
Release date:2004-08-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of ADP-ribose-1''-monophosphatase (Appr-1''-pase), a ubiquitous cellular processing enzyme
Protein Sci., 14, 2005
1NL6
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Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With A Covalent Azepanone Inhibitor
Descriptor: 5-(2-MORPHOLIN-4-YLETHOXY)BENZOFURAN-2-CARBOXYLIC ACID ((S)-3-METHYL-1-{(S)-3-OXO-1-[2-(3-PYRIDIN-2-YLPHENYL)ACETYL]AZEPAN-4-YLCARBAMOYL}BUTYL)AMIDE, Cathepsin K
Authors:Smith, W.W, Janson, C.A, Zhao, B.
Deposit date:2003-01-06
Release date:2003-01-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Azepanone-based inhibitors of human and rat cathepsin K
J.Med.Chem., 44, 2001
1NL7
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Z. ramigera biosynthetic thiolase, acetylated enzyme complexed with CoA at pH 9.5
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, SULFATE ION
Authors:Kursula, P, Wierenga, R.K.
Deposit date:2003-01-06
Release date:2004-04-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Crystal structures of Z. ramigera biosynthetic thiolase
To be Published
1NLB
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crystal structure of anti-HCV monoclonal antibody 19D9D6
Descriptor: antibody 19D9D6 heavy chain, antibody 19D9D6 light chain
Authors:Menez, R, Bossus, M, Muller, B, Sibai, G, Dalbon, P, Ducancel, F, Jolivet-Reynaud, C, Stura, E.
Deposit date:2003-01-07
Release date:2003-02-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a hydrophobic immunodominant antigenic site on hepatitis C virus core protein complexed to monoclonal antibody 19D9D6.
J.Immunol., 170, 2003
1NLN
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CRYSTAL STRUCTURE OF HUMAN ADENOVIRUS 2 PROTEINASE WITH ITS 11 AMINO ACID COFACTOR AT 1.6 ANGSTROM RESOLUTION
Descriptor: ACETIC ACID, Adenain, PVIC
Authors:McGrath, W.J, Ding, J, Sweet, R.M, Mangel, W.F.
Deposit date:2003-01-07
Release date:2003-08-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic structure at 1.6-A resolution of the human adenovirus proteinase in a covalent complex with its 11-amino-acid peptide cofactor: insights on a new fold
Biochim.Biophys.Acta, 1648, 2003
1NN2
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THREE-DIMENSIONAL STRUCTURE OF THE NEURAMINIDASE OF INFLUENZA VIRUS A(SLASH)TOKYO(SLASH)3(SLASH)67 AT 2.2 ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Varghese, J.N, Colman, P.M.
Deposit date:1991-03-28
Release date:1992-07-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of the neuraminidase of influenza virus A/Tokyo/3/67 at 2.2 A resolution.
J.Mol.Biol., 221, 1991
1NN6
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Human Pro-Chymase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase
Authors:Reiling, K.K, Krucinski, J, Miercke, L.J.W, Raymond, W.W, Caughey, G.H, Stroud, R.M.
Deposit date:2003-01-12
Release date:2003-03-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of human pro-chymase: a model for the activating transition of granule-associated proteases.
Biochemistry, 42, 2003
1NNI
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Azobenzene Reductase from Bacillus subtilis
Descriptor: FLAVIN MONONUCLEOTIDE, hypothetical protein yhda
Authors:Cuff, M.E, Kim, Y, Maj, L, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-01-13
Release date:2003-07-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Azobenzene Reductase from Bacillus subtilis
To be Published, 2003
1NO9
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Design of weakly basic thrombin inhibitors incorporating novel P1 binding functions: molecular and X-ray crystallographic studies.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha Thrombin, N4-(N,N-DIPHENYLCARBAMOYL)-AMINOGUANIDINE, ...
Authors:De Simone, G, Menchise, V, Omaggio, S, Pedone, C, Scozzafava, A, Supuran, C.T.
Deposit date:2003-01-16
Release date:2003-08-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DESIGN OF WEAKLY BASIC THROMBIN INHIBITORS INCORPORATING NOVEL P1 BINDING FUNCTIONS: MOLECULAR AND X-RAY CRYSTALLOGRAPHIC STUDIES
Biochemistry, 42, 2003
1NOD
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MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TETRAHYDROBIOPTERIN AND SUBSTRATE L-ARGININE
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ARGININE, NITRIC OXIDE SYNTHASE, ...
Authors:Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
Deposit date:1998-03-05
Release date:1999-03-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of nitric oxide synthase oxygenase dimer with pterin and substrate.
Science, 279, 1998
1NOW
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Human lysosomal beta-hexosaminidase isoform B in complex with (2R,3R,4S,5R)-2-Acetamido-3,4-Dihydroxy-5-Hydroxymethyl-Piperidinium Chloride (GalNAc-isofagomine)
Descriptor: (2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Mark, B.L, Mahuran, D.J, Cherney, M.M, Zhao, D, Knapp, S, James, M.N.G.
Deposit date:2003-01-16
Release date:2003-04-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Human beta-hexosaminidase B: Understanding the molecular basis of Sandhoff and Tay-Sachs disease
J.Mol.Biol., 327, 2003
1NQ6
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Crystal Structure of the catalytic domain of xylanase A from Streptomyces halstedii JM8
Descriptor: MAGNESIUM ION, Xys1
Authors:Canals, A, Vega, M.C, Gomis-Ruth, F.X, Santamaria, R.I, Coll, M.
Deposit date:2003-01-21
Release date:2004-01-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of xylanase Xys1delta from Streptomyces halstedii.
Acta Crystallogr.,Sect.D, 59, 2003
1NR9
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Crystal Structure of Escherichia coli 1262 (APC5008), Putative Isomerase
Descriptor: MAGNESIUM ION, Protein YCGM
Authors:Kim, Y, Joachimiak, A, Edwards, A, Skarina, T, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-01-24
Release date:2003-07-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Escherichia coli Putative Isomerase EC1262 (APC5008)
To be Published
1NRA
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SOLUTION STRUCTURE OF AN OLD WORLD-LIKE NEUROTOXIN FROM THE VENOM OF THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING
Descriptor: NEUROTOXIN V, CSE-V
Authors:Jablonsky, M.J, Krishna, N.R.
Deposit date:1995-01-03
Release date:1995-02-27
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Solution structure of an Old World-like neurotoxin from the venom of the New World scorpion Centruroides sculpturatus Ewing.
J.Mol.Biol., 248, 1995
1NU6
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Crystal structure of human Dipeptidyl Peptidase IV (DPP-IV)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase IV, MERCURY (II) ION
Authors:Hennig, M, Stihle, M, Thoma, R, Ruf, A.
Deposit date:2003-01-31
Release date:2003-08-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of Proline-Specific Exopeptidase Activity as Observed in Human Dipeptidyl Peptidase-IV.
Structure, 11, 2003
1NUB
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HELIX C DELETION MUTANT OF BM-40 FS-EC DOMAIN PAIR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BASEMENT MEMBRANE PROTEIN BM-40, CALCIUM ION
Authors:Hohenester, E, Sasaki, T, Timpl, R.
Deposit date:1997-12-05
Release date:1998-12-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure and mapping by site-directed mutagenesis of the collagen-binding epitope of an activated form of BM-40/SPARC/osteonectin.
EMBO J., 17, 1998
1NWR
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Crystal structure of human cartilage gp39 (HC-gp39)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1
Authors:Fusetti, F, Pijning, T, Kalk, K.H, Bos, E, Dijkstra, B.W.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure and Carbohydrate-binding Properties of the Human Cartilage Glycoprotein-39
J.Biol.Chem., 278, 2003
1NX4
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The crystal structure of carbapenem synthase (CarC)
Descriptor: 2-OXOGLUTARIC ACID, Carbapenem synthase, FE (III) ION
Authors:Clifton, I.J, Doan, L.X, Sleeman, M.C, Topf, M, Suzuki, H, Wilmouth, R.C, Schofield, C.J.
Deposit date:2003-02-08
Release date:2003-06-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of carbapenem synthase (CarC).
J.Biol.Chem., 278, 2003
1NXH
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X-RAY STRUCTURE: NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT87
Descriptor: MTH396 protein
Authors:Khayat, R, Savchenko, A, Edwards, A, Arowsmith, C, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-02-10
Release date:2004-02-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-RAY STRUCTURE OF MTH396
To be Published
1NY2
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Human alpha thrombin inhibited by RPPGF and hirugen
Descriptor: Hirugen, Inhibitor peptide RPPGF, thrombin Heavy chain, ...
Authors:Krishnan, R, Tulinsky, A, Schmaier, A.H, Hasan, A.A, Warnock, M, Srikanth, S, Mahdi, F.
Deposit date:2003-02-11
Release date:2003-03-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanisms of Arg-Pro-Pro-Gly-Phe inhibition of thrombin.
Am.J.Physiol.Heart Circ.Physiol., 285, 2003
1NZS
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NMR structures of phosphorylated carboxy terminus of bovine rhodopsin in arrestin-bound state
Descriptor: 19-mer peptide fragment of RHODOPSIN
Authors:Kisselev, O.G, McDowell, J.H, Hargrave, P.A.
Deposit date:2003-02-19
Release date:2004-03-02
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:The arrestin-bound conformation and dynamics of the phosphorylated carboxy-terminal region of rhodopsin.
Febs Lett., 564, 2004

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