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New PDB entries with X-ray structure factor data
8UVW
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Crystal structure of RAD51-BRCA2 Cter complex
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Longo, M.A, Perera, R, Tsai, C.-L, Tainer, J.A.
Deposit date:2023-11-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Molecular Recognition of RAD51 by the BRCA2 Carboxy Terminal Domain
To Be Published
8UWN
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Crystal structure of human CLK1 kinase in complex with compound 3
Descriptor: Dual specificity protein kinase CLK1, SULFATE ION, cyclopropyl(4-{(8R)-6-[4-(piperazin-1-yl)phenyl]pyrrolo[1,2-b]pyridazin-4-yl}piperazin-1-yl)methanone
Authors:Kim, J.L.
Deposit date:2023-11-07
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An ALK2 inhibitor, BLU-782, prevents heterotopic ossification in a mouse model of fibrodysplasia ossificans progressiva.
Sci Transl Med, 16, 2024
8UWR
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Crystal structure of human ACVR1 (ALK2) kinase in complex with compound 3
Descriptor: Activin receptor type-1, SULFATE ION, cyclopropyl(4-{(8R)-6-[4-(piperazin-1-yl)phenyl]pyrrolo[1,2-b]pyridazin-4-yl}piperazin-1-yl)methanone
Authors:Kim, J.L.
Deposit date:2023-11-07
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:An ALK2 inhibitor, BLU-782, prevents heterotopic ossification in a mouse model of fibrodysplasia ossificans progressiva.
Sci Transl Med, 16, 2024
8V5U
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Human SIRT3 bound to p53-AMC peptide and Honokiol
Descriptor: (1P)-3',5-di(prop-2-en-1-yl)[1,1'-biphenyl]-2,4'-diol, NAD-dependent protein deacetylase sirtuin-3, mitochondrial, ...
Authors:Chakrabarti, R, Ghosh, A, Guan, X, Upadhyay, A, Dumpati, R.K, Munshi, S, Roy, S, Chall, S, Rahnamoun, A, Reverdy, C, Errasti, G, Delacroix, T.
Deposit date:2023-12-01
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Computationally Driven Discovery and Characterization of SIRT3-Activating Compounds that Fully Recover Catalytic Activity under ${\mathrm{NAD}}^{+}$ Depletion
Phys. Rev. X, 14, 2024
8VA9
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Crystal structure of FeII/MnII CtCADD from Chlamydia trachomatis
Descriptor: 4-aminobenzoate synthase, FE (II) ION, GLYCEROL, ...
Authors:Phan, H.N, Swartz, P.D, Makris, T.M.
Deposit date:2023-12-11
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Assembly of a Heterobimetallic Fe/Mn Cofactor in the para -Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping.
Biochemistry, 2024
8VAB
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Crystal structure of FeII/FeII CtCADD from Chlamydia trachomatis
Descriptor: 4-aminobenzoate synthase, FE (II) ION
Authors:Phan, H.N, Swartz, P.D, Makris, T.M.
Deposit date:2023-12-11
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Assembly of a Heterobimetallic Fe/Mn Cofactor in the para -Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping.
Biochemistry, 2024
8VAG
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Crystal structure of MnII/MnII CtCADD from Chlamydia trachomatis
Descriptor: 4-aminobenzoate synthase, MANGANESE (II) ION
Authors:Phan, H.N, Swartz, P.D, Makris, T.M.
Deposit date:2023-12-11
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Assembly of a Heterobimetallic Fe/Mn Cofactor in the para -Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping.
Biochemistry, 2024
8VAI
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Crystal structure of apo CtCADD from Chlamydia trachomatis
Descriptor: 4-aminobenzoate synthase, GLYCEROL
Authors:Phan, H.N, Swartz, P.D, Makris, T.M.
Deposit date:2023-12-11
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Assembly of a Heterobimetallic Fe/Mn Cofactor in the para -Aminobenzoate Synthase Chlamydia Protein Associating with Death Domains (CADD) Initiates Long-Range Radical Hole-Hopping.
Biochemistry, 2024
8VAU
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Nicotinamide Riboside and CD38: Covalent Inhibition and Live-Cell Labeling
Descriptor: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, Nicotinamide riboside, alpha-D-ribofuranose
Authors:Kao, G, Zhang, X.N, Nasertorabi, F, Katz, B.B, Li, Z, Dai, Z, Zhang, Z, Zhang, L, Louie, S.G, Cherezov, V, Zhang, Y.
Deposit date:2023-12-11
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nicotinamide Riboside and CD38: Covalent Inhibition and Live-Cell Labeling
Jacs Au, 2024
8VGA
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Crystal Structure of Guanine Nucleotide-Binding Protein (G Protein) Alpha-1 Subunit from Selaginella moellendorffii in complex with GTP gamma S
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Guanine nucleotide-binding protein alpha subunit, MAGNESIUM ION
Authors:Lee, S.G, Jez, J.M.
Deposit date:2023-12-27
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.57602485808 Å)
Cite:Structure-function analysis of plant G-protein regulatory mechanisms identifies key G alpha-RGS protein interactions.
J.Biol.Chem., 300, 2024
8VGB
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Crystal Structure of Guanine Nucleotide-Binding Protein Alpha Subunit (G Protein) from Oryza sativa in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein alpha-1 subunit, MAGNESIUM ION
Authors:Lee, S.G, Jez, J.M.
Deposit date:2023-12-27
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structure-function analysis of plant G-protein regulatory mechanisms identifies key G alpha-RGS protein interactions.
J.Biol.Chem., 300, 2024
8VIP
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Crystal structure of the N-terminal domain of fatty acid kinase A (FakA) from Staphylococcus aureus (Mn and AMP-PNP)
Descriptor: FATTY ACID KINASE A, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Bose, J.L.
Deposit date:2024-01-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular insights into the structure and function of the Staphylococcus aureus fatty acid kinase
J.Biol.Chem., 2024
8VIQ
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Crystal structure of the N-terminal domain of fatty acid kinase A (FakA) from Staphylococcus aureus (Mg and AMP-PNP)
Descriptor: FATTY ACID KINASE A, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Bose, J.L.
Deposit date:2024-01-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Molecular insights into the structure and function of the Staphylococcus aureus fatty acid kinase
J.Biol.Chem., 2024
8VIR
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BU of 8vir by Molmil
Crystal structure of the N-terminal domain of fatty acid kinase A (FakA) from Staphylococcus aureus (Apo)
Descriptor: FATTY ACID KINASE A
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Bose, J.L.
Deposit date:2024-01-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular insights into the structure and function of the Staphylococcus aureus fatty acid kinase
J.Biol.Chem., 2024
8VIT
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Crystal structure of the N-terminal domain of fatty acid kinase A (FakA) from Staphylococcus aureus (Mg and ADP)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FATTY ACID KINASE A, MAGNESIUM ION, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Bose, J.L.
Deposit date:2024-01-05
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Molecular insights into the structure and function of the Staphylococcus aureus fatty acid kinase
J.Biol.Chem., 2024
8VJD
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Human R14A Pin1 covalently bound to inhibitor 158F10 in P21 21 21 space group
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Inhibitor 158F10, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
Authors:Rodriguez, I, Blaha, G.
Deposit date:2024-01-06
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Targeted Degradation of Pin1 by Protein Destabilizing Compounds
To Be Published
8VJE
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Human R14A Pin1 covalently bound to inhibitor 158F10
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Inhibitor 158F10, ...
Authors:Rodriguez, I, Blaha, G.
Deposit date:2024-01-06
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Targeted Degradation of Pin1 by Protein Destabilizing Compounds
To Be Published
8VJF
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Human R14A Pin1 covalently bound to inhibitor 158D9
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
Authors:Rodriguez, I, Blaha, G.
Deposit date:2024-01-06
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Targeted Degradation of Pin1 by Protein Destabilizing Compounds
To Be Published
8VJG
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Human R14A Pin1 covalently bound to inhibitor 164A10
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Nalpha-{(2S)-1-[(3S)-2-acetyl-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole-3-carbonyl]piperidine-2-carbonyl}-5-fluoro-L-tryptophanamide, ...
Authors:Rodriguez, I, Blaha, G.
Deposit date:2024-01-06
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Targeted Degradation of Pin1 by Protein Destabilizing Compounds
To Be Published
8VYD
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A novel synthase generates m4(2)C to stabilize the archaeal ribosome
Descriptor: SAM-dependent methyltransferase, UPF0020 family, SODIUM ION
Authors:Ho, P.S, Santangelo, T.J, Fluke, K.
Deposit date:2024-02-08
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A novel synthase generates m4(2)C to stabilize the archaeal ribosome
To Be Published
8WEB
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BU of 8web by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MDIS1-interacting receptor like kinase 2
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WEC
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Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and SCOOP12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WED
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Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and Fusarium oxysporum SCOOPL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WEE
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BU of 8wee by Molmil
Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with SCOOP12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024
8WEF
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Crystal structure of Brassica napus MIK2 ectodomain in complex with Fusarium oxysporum SCOOPL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wan, L.H, Hu, Y.X, Wu, H.M.
Deposit date:2023-09-17
Release date:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanistic study of SCOOPs recognition by MIK2-BAK1 complex reveals the role of N-glycans in plant ligand-receptor-coreceptor complex formation
Nature Plants, 2024

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PDB entries from 2024-11-06

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