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NMR 拘束データを含む全ての PDB エントリー
8OYD
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BU of 8oyd by Molmil
TrkB transmembrane domain NMR structure in DMPC/DHPC bicelles
分子名称: BDNF/NT-3 growth factors receptor
著者Kot, E.F, Mineev, K.S, Goncharuk, S.A.
登録日2023-05-04
公開日2024-05-15
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献Structural basis for the transmembrane signaling and antidepressant-induced activation of the receptor tyrosine kinase TrkB.
Nat Commun, 15, 2024
8OZZ
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BU of 8ozz by Molmil
PH domain of AKT-like kinase in Trypanosoma cruzi
分子名称: PH domain of Akt-like kinase in Trypanosoma cruzi
著者Stadler, K.A, Ortiz-Joya, L.J, Zangger, K, Gubensaek, N.
登録日2023-05-09
公開日2024-05-08
実験手法SOLUTION NMR
主引用文献Structural investigation of Trypanosoma cruzi Akt-like kinase as drug target against Chagas disease.
Sci Rep, 14, 2024
8P25
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BU of 8p25 by Molmil
Solution structure of a chimeric U2AF2 RRM2 / FUBP1 N-Box
分子名称: Splicing factor U2AF 65 kDa subunit,Far upstream element-binding protein 1
著者Hipp, C, Sattler, M.
登録日2023-05-14
公開日2023-07-26
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献FUBP1 is a general splicing factor facilitating 3' splice site recognition and splicing of long introns.
Mol.Cell, 83, 2023
8P3A
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BU of 8p3a by Molmil
bacteriophage T5 l-alanoyl-d-glutamate peptidase Zn2+/Ca2+ form
分子名称: CALCIUM ION, L-alanyl-D-glutamate peptidase, ZINC ION
著者Prokhorov, D.A, Kutyshenko, V.P, Mikoulinskaia, G.V.
登録日2023-05-17
公開日2023-07-05
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Mechanism of Ca2+-dependent activation of L-alanoyl-D-glutamate peptidase bacteriophage T5.
To Be Published
8P66
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BU of 8p66 by Molmil
Structural basis of aggregate binding/recognition by the AAA+ disaggregase ClpG
分子名称: Clp protease ClpC,Heat shock survival AAA family ATPase ClpK, ZINC ION
著者Simon, B, Hennig, J, Mogk, A.
登録日2023-05-25
公開日2023-11-01
最終更新日2023-11-22
実験手法SOLUTION NMR
主引用文献Structural basis of aggregate binding by the AAA+ disaggregase ClpG.
J.Biol.Chem., 299, 2023
8P7G
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BU of 8p7g by Molmil
Structural characterization of PHOX2B and its DNA interactions shed lights into the molecular basis of the + 7Ala variant pathogenicity in CCHS
分子名称: Paired mesoderm homeobox protein 2B
著者Russo, L, Diana, D, Fattorusso, R.
登録日2023-05-30
公開日2024-05-15
最終更新日2024-06-26
実験手法SOLUTION NMR
主引用文献Structural characterization of PHOX2B and its DNA interaction shed light on the molecular basis of the +7Ala variant pathogenicity in CCHS.
Chem Sci, 15, 2024
8PBV
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BU of 8pbv by Molmil
Solution NMR structure of D. melanogaster TotA
分子名称: Protein Turandot A
著者Abriata, L.A.
登録日2023-06-09
公開日2024-04-17
実験手法SOLUTION NMR
主引用文献A humoral stress response protects Drosophila tissues from antimicrobial peptides.
Curr.Biol., 34, 2024
8PEK
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BU of 8pek by Molmil
Structure of the dimeric, periplasmic domain of ExbD
分子名称: Biopolymer transport protein ExbD
著者Zinke, M, Bardiaux, B, Izadi-Pruneyre, N.
登録日2023-06-14
公開日2023-09-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Ton motor conformational switch and peptidoglycan role in bacterial nutrient uptake.
Nat Commun, 15, 2024
8PI0
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BU of 8pi0 by Molmil
NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with 5-(1H-indol-2-l)piperazin-2-one
分子名称: (5~{S})-5-(1~{H}-indol-2-yl)piperazin-2-one, V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog, isoform CRA_b
著者Buetikofer, M, Orts, J.
登録日2023-06-20
公開日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with 5-(1H-indol-2-l)piperazin-2-one
To Be Published
8PIY
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BU of 8piy by Molmil
NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with (2E)-3-(1H-indol-2-yl)prop-2-enoic acid
分子名称: (~{E})-3-(1~{H}-indol-3-yl)prop-2-enoic acid, RASK GTPase (Fragment)
著者Buetikofer, M, Orts, J.
登録日2023-06-22
公開日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with 5-(1H-indol-2-l)piperazin-2-one
To Be Published
8PKZ
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BU of 8pkz by Molmil
NMR solution structure of PilF-GSPIIB in the c-di-GMP bound state
分子名称: ATP-binding motif-containing protein pilF, GUANOSINE-5'-MONOPHOSPHATE
著者Neissner, K, Woehnert, J.
登録日2023-06-27
公開日2024-07-10
実験手法SOLUTION NMR
主引用文献NMR solution structure of GSPIIB of Thermus thermophilus in the c-di-GMP bound state
To Be Published
8PMB
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BU of 8pmb by Molmil
Minimal I-motif comprising three cytosine-cytosine+ base-pairs
分子名称: minimal I-motif C21T333
著者Ghezzo, M, Trajkovski, M, Plavec, J, Sissi, C.
登録日2023-06-28
公開日2023-09-13
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献A Screening Protocol for Exploring Loop Length Requirements for the Formation of a Three Cytosine-Cytosine + Base-Paired i-Motif.
Angew.Chem.Int.Ed.Engl., 62, 2023
8POI
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BU of 8poi by Molmil
Molecular Docking of SPF30 Tudor domain with synthetic inhibitor 4-(pyridin-2-yl)thiazol-2-amine
分子名称: 4-pyridin-2-yl-1,3-thiazol-2-amine, Survival of motor neuron-related-splicing factor 30
著者Borggraefe, J, Gaussmann, S, Sattler, M.
登録日2023-07-04
公開日2023-08-23
最終更新日2023-08-30
実験手法SOLUTION NMR
主引用文献Pharmacological perturbation of the phase-separating protein SMNDC1.
Nat Commun, 14, 2023
8PQU
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BU of 8pqu by Molmil
NMR structure of the Thermus thermophilus PilF-GSPIIB domain in the apo state
分子名称: ATP-binding motif-containing protein pilF
著者Neissner, K, Woehnert, J.
登録日2023-07-12
公開日2024-07-24
実験手法SOLUTION NMR
主引用文献NMR structure of the Thermus thermophilus PilF-GSPIIB domain in the apo state
To Be Published
8PSB
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BU of 8psb by Molmil
Three-layered parallel G-quadruplex with snapback loop from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*AP*CP*GP*GP*GP*T)-3')
著者Vianney, Y.M, Schroeder, N, Jana, J, Chojetzki, G, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-25
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
8PSC
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BU of 8psc by Molmil
Three-layered basket-type G-quadruplex from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*AP*GP*(BG)P*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
著者Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
8PSE
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BU of 8pse by Molmil
(3+1) hybrid G-quadruplex from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*(BG)P*GP*TP*AP*CP*GP*GP*GP*T)-3')
著者Jana, J, Vianney, Y.M, Schroder, N, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
8PSH
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BU of 8psh by Molmil
HIGH RESOLUTION NMR STRUCTURE OF THE STEREOREGULAR (ALL-RP)-PHOSPHOROTHIOATE-DNA/RNA HYBRID D (G*PS*C*PS*G*PS*T*PS*C*PS*A*PS*G*PS*G)R(CCUGACGC), MINIMIZED AVERAGE STRUCTURE
分子名称: DNA (5'-D(*DGP*(SC)P*(GS)P*(PST)P*(SC)P*(AS)P*(GS)P*(GS))-3'), RNA (5'-R(*CP*CP*UP*GP*AP*CP*GP*C)-3')
著者Bachelin, M, Hessler, G, Kurz, G, Hacia, J.G, Dervan, P.B, Kessler, H.
登録日1997-10-13
公開日1998-05-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of a Stereoregular Phosphorothioate DNA/RNA Duplex
Nat.Struct.Biol., 5, 1998
8PSI
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BU of 8psi by Molmil
G-quadruplex with a 1-nt V-shaped loop from a G-rich sequence with five G-runs
分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
著者Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K.
登録日2023-07-13
公開日2023-09-27
最終更新日2023-10-18
実験手法SOLUTION NMR
主引用文献Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect.
J.Am.Chem.Soc., 145, 2023
8PTL
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BU of 8ptl by Molmil
human PHOX2B C-terminal domain including the polyA fragment at 278K
分子名称: Paired mesoderm homeobox protein 2B
著者Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
登録日2023-07-14
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
8PUI
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BU of 8pui by Molmil
human PHOX2B C-terminal domain including the polyA fragment at 298K
分子名称: Paired mesoderm homeobox protein 2B
著者Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
登録日2023-07-17
公開日2024-03-13
実験手法SOLUTION NMR
主引用文献Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
8PWR
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BU of 8pwr by Molmil
TINA-conjugated antiparallel DNA triplex
分子名称: DNA (5'-D(*AP*GP*GP*AP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*TP*CP*CP*T)-3'), DNA (5'-D(*TP*GP*GP*TP*GP*(J32)P*GP*T)-3')
著者Garavis, M, Edwards, P.J.B, Serrano-Chacon, I, Doluca, O, Filichev, V.V, Gonzalez, C.
登録日2023-07-21
公開日2024-01-17
最終更新日2024-03-27
実験手法SOLUTION NMR
主引用文献Understanding intercalative modulation of G-rich sequence folding: solution structure of a TINA-conjugated antiparallel DNA triplex.
Nucleic Acids Res., 52, 2024
8PWT
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Solution structure of the peptide U11-MYRTX-Tb1a from the venom of the ant Tetramorium bicarinatum
分子名称: U11-myrmicitoxin-Tb1a
著者Jouvensal, L, Paquet, F, Loth, K.
登録日2023-07-21
公開日2023-10-25
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Discovery of an Insect Neuroactive Helix Ring Peptide from Ant Venom.
Toxins, 15, 2023
8PXS
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BU of 8pxs by Molmil
Short RNA binding to peptide amyloids
分子名称: RNA (5'-R(P*GP*UP*CP*A)-3'), VAL-ALA-GLN-ALA-GLN-ILE-ASN-ILE
著者Rout, S.K, Cadalbert, R, Schroder, N, Wiegand, T, Zehnder, J, Gampp, O, Guntert, P, Kringler, D, Kreutz, C, Knorlein, A, Hall, J, Greenwald, J, Riek, R.
登録日2023-07-24
公開日2023-10-18
最終更新日2024-10-16
実験手法SOLID-STATE NMR
主引用文献An Analysis of Nucleotide-Amyloid Interactions Reveals Selective Binding to Codon-Sized RNA.
J.Am.Chem.Soc., 145, 2023
8PXW
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Structure of the WW domain tandem of PRPF40A
分子名称: Pre-mRNA-processing factor 40 homolog A
著者Martinez-Lumbreras, S, Sattler, M.
登録日2023-07-24
公開日2024-04-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Intramolecular autoinhibition regulates the selectivity of PRPF40A tandem WW domains for proline-rich motifs.
Nat Commun, 15, 2024

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