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NMR 拘束データを含む全ての PDB エントリー
5UZD
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Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A2-DNA structure
分子名称: DNA (5'-D(*GP*CP*AP*TP*CP*GP*AP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*TP*CP*GP*AP*TP*GP*C)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZF
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BU of 5uzf by Molmil
Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A6-DNA structure
分子名称: DNA (5'-D(*CP*GP*AP*TP*TP*TP*TP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*AP*AP*AP*AP*TP*CP*G)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZI
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BU of 5uzi by Molmil
Insights into Watson-Crick/Hoogsteen Breathing Dynamics and Damage Repair from the Solution Structure and Dynamic Ensemble of DNA Duplexes containing m1A - A6-DNAm1A16 structure
分子名称: DNA (5'-D(*CP*GP*AP*TP*TP*TP*TP*TP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*(M1A)P*AP*AP*AP*AP*AP*TP*CP*G)-3')
著者Sathyamoorthy, B, Shi, H, Xue, Y, Al-Hashimi, H.M.
登録日2017-02-26
公開日2017-04-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into Watson-Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A.
Nucleic Acids Res., 45, 2017
5UZL
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BU of 5uzl by Molmil
Brassica napus DGAT1 exosite
分子名称: O-acyltransferase
著者Acedo, J.Z, Vederas, J.C.
登録日2017-02-26
公開日2018-01-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Diacylglycerol Acyltransferase 1 Is Regulated by Its N-Terminal Domain in Response to Allosteric Effectors.
Plant Physiol., 175, 2017
5UZT
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BU of 5uzt by Molmil
Structure of wild type pre-miR21 apical loop
分子名称: pre-miR-21
著者Shortridge, M.D, Varani, G.
登録日2017-02-27
公開日2017-05-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.
ACS Chem. Biol., 12, 2017
5UZZ
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Structure of wild type pre-miR21 apical loop
分子名称: 14-mer Peptide, pre-miR21
著者Shortridge, M.D, Varani, G.
登録日2017-02-27
公開日2017-06-14
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.
ACS Chem. Biol., 12, 2017
5V0Y
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Solution structure of arenicin-3.
分子名称: arenicin-3
著者Edwards, I.A, Mobli, M.
登録日2017-02-28
公開日2018-08-08
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria
Nat Commun, 2020
5V11
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BU of 5v11 by Molmil
Solution structure of arenicin-3 synthetic analog.
分子名称: AA139
著者Edwards, I.A, Mobli, M.
登録日2017-03-01
公開日2018-08-08
最終更新日2020-01-08
実験手法SOLUTION NMR
主引用文献Elucidating the Lipid Binding Properties of Membrane-Active Peptides Using Cyclised Nanodiscs.
Front Chem, 7, 2019
5V16
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5V17
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HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
分子名称: RNA (41-MER)
著者Tolbert, M, Morgan, C.E, Tolbert, B.S.
登録日2017-03-01
公開日2017-07-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
5V1E
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BU of 5v1e by Molmil
Suboptimization of a glycine rich peptide allows the combinatorial space exploration for designing novel antimicrobial peptides
分子名称: Guavanin 2
著者Alves, E.S.F, Matos, C.O.
登録日2017-03-02
公開日2018-03-07
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献In silico optimization of a guava antimicrobial peptide enables combinatorial exploration for peptide design.
Nat Commun, 9, 2018
5V2B
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BU of 5v2b by Molmil
Peptide 38148 modified from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
分子名称: Thrombospondin-related sporozoite protein
著者Bermudez, A, Patarroyo, M.E.
登録日2017-03-03
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Peptide 38148 modified from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
To Be Published
5V2G
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BU of 5v2g by Molmil
De Novo Design of Novel Covalent Constrained Meso-size Peptide Scaffolds with Unique Tertiary Structures
分子名称: 1,3,5-tris(bromomethyl)benzene, 20-mer Peptide
著者Dang, B, Wu, H, Mulligan, V.K, Mravic, M, Wu, Y, Lemmin, T, Ford, A, Silva, D, Baker, D, DeGrado, W.F.
登録日2017-03-03
公開日2017-09-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献De novo design of covalently constrained mesosize protein scaffolds with unique tertiary structures.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5V2R
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BU of 5v2r by Molmil
Structure of a GA Rich 8x8 Nucleotide RNA Internal Loop
分子名称: RNA (5'-R(*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*A)-3')
著者Kauffmann, A.D, Kennedy, S.D, Turner, D.H.
登録日2017-03-06
公開日2017-07-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Nuclear Magnetic Resonance Structure of an 8 8 Nucleotide RNA Internal Loop Flanked on Each Side by Three Watson-Crick Pairs and Comparison to Three-Dimensional Predictions.
Biochemistry, 56, 2017
5V4C
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BU of 5v4c by Molmil
Peptide 38136 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoites (CelTOS)
分子名称: Peptide 38136
著者Bermudez, A, Patarroyo, M.E.
登録日2017-03-09
公開日2018-08-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Peptide 38136 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoites (CelTOS)
To Be Published
5V4U
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BU of 5v4u by Molmil
Solution structure of VKK38 bound to plasminogen kringle 2
分子名称: M protein
著者Yuan, Y, Castellino, F.
登録日2017-03-10
公開日2017-07-26
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Conformationally organized lysine isosteres in Streptococcus pyogenes M protein mediate direct high-affinity binding to human plasminogen.
J. Biol. Chem., 292, 2017
5V7Z
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BU of 5v7z by Molmil
SSNMR Structure of the Human RIP1/RIP3 Necrosome
分子名称: PRO-LEU-VAL-ASN-ILE-TYR-ASN-CYS-SER-GLY-VAL-GLN-VAL-GLY-ASP, THR-ILE-TYR-ASN-SER-THR-GLY-ILE-GLN-ILE-GLY-ALA-TYR-ASN-TYR-MET-GLU-ILE
著者Mompean, M, Li, W, Li, J, Laage, S, Siemer, A.B, Wu, H, McDermott, A.E.
登録日2017-03-21
公開日2018-03-28
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The Structure of the Necrosome RIPK1-RIPK3 Core, a Human Hetero-Amyloid Signaling Complex.
Cell, 173, 2018
5VAV
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Design of a novel cyclic peptide that alleviates symptoms in a murine model of inflammatory bowel disease
分子名称: cyc-MC12
著者Daly, N.L, Cobos Caceres, C.
登録日2017-03-28
公開日2017-05-10
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献An engineered cyclic peptide alleviates symptoms of inflammation in a murine model of inflammatory bowel disease.
J. Biol. Chem., 292, 2017
5VEY
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BU of 5vey by Molmil
Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (653-708)
分子名称: E3 ubiquitin-protein ligase RNF169, Histone H2B type 1-J,Histone H2A type 1-B/E, Polyubiquitin-B
著者Hu, Q, Botuyan, M.V, Cui, G, Mer, G.
登録日2017-04-06
公開日2017-05-17
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Mol. Cell, 66, 2017
5VF0
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Solution NMR structure of human RAD18 (198-240) in complex with ubiquitin
分子名称: E3 ubiquitin-protein ligase RAD18, Polyubiquitin-B, ZINC ION
著者Hu, Q, Botuyan, M.V, Mer, G.
登録日2017-04-06
公開日2017-05-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Mol. Cell, 66, 2017
5VFK
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BU of 5vfk by Molmil
Solution structure of an archaeal DUF61 family protein SSO0941
分子名称: Uncharacterized protein
著者Zhou, T, Wang, J, Feng, Y.
登録日2017-04-07
公開日2018-03-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of an archaeal DUF61 family protein SSO0941 encoded by a gene in the operon of box C/D RNA protein complexes.
J. Struct. Biol., 203, 2018
5VFW
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An engineered cyclic peptide alleviates symptoms of inflammation in a murine model of inflammatory bowel disease
分子名称: Annexin A1
著者Daly, N.L, Cobos Caceres, C.
登録日2017-04-09
公開日2017-05-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An engineered cyclic peptide alleviates symptoms of inflammation in a murine model of inflammatory bowel disease.
J. Biol. Chem., 292, 2017
5VH7
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BU of 5vh7 by Molmil
Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1
分子名称: RNA (5'-R(*GP*AP*CP*CP*AP*GP*CP*AP*G)-3')
著者Chen, J.L, VanEtten, D.M, Fountain, M.A, Yildirim, I, Disney, M.D.
登録日2017-04-12
公開日2017-06-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1.
Biochemistry, 56, 2017
5VH8
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Structure and dynamics of RNA repeat expansions that cause Huntington's Disease and myotonic dystrophy type 1
分子名称: RNA (5'-R(*GP*AP*CP*CP*UP*GP*CP*UP*GP*CP*UP*GP*GP*UP*C)-3')
著者Chen, J.L, VanEtten, D.M, Fountain, M.A, Yildirim, I, Disney, M.D.
登録日2017-04-12
公開日2017-06-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of RNA Repeat Expansions That Cause Huntington's Disease and Myotonic Dystrophy Type 1.
Biochemistry, 56, 2017
5VJ8
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Backbone structure of the Yersinia pestis outer membrane protein Ail in phospholipid bilayer nanodisc
分子名称: Adhesion invasion locus
著者Dutta, S.K, Yong, Y, Marassi, F.M.
登録日2017-04-19
公開日2017-05-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights into the Yersinia pestis Outer Membrane Protein Ail in Lipid Bilayers.
J Phys Chem B, 121, 2017

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