Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
New PDB entries
8VWN
DownloadVisualize
BU of 8vwn by Molmil
Crystal structure of Vibrio cholerae NFeoB in the GDP-bound form
Descriptor: Ferrous iron transport protein B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Lee, M, Smith, A.T.
Deposit date:2024-02-01
Release date:2024-10-30
Method:X-RAY DIFFRACTION (4.25 Å)
Cite:Structural determinants of Vibrio cholerae FeoB nucleotide promiscuity.
J.Biol.Chem., 300, 2024
8VWS
DownloadVisualize
BU of 8vws by Molmil
Nucleosome containing 8oxoG at SHL-6
Descriptor: 601 I strand (non-damaged strand), 601 J strand (damaged strand), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Nucleosome containing 8oxoG at SHL-6
To Be Published
8VWT
DownloadVisualize
BU of 8vwt by Molmil
OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
Descriptor: 601 I strand (non-damaged strand), 601 J strand (damaged strand), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
To Be Published
8VWU
DownloadVisualize
BU of 8vwu by Molmil
Nucleosome containing 8oxoG at SHL4
Descriptor: 601 I strand (damaged strand), 601 J strand (non-damaged strand), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Nucleosome containing 8oxoG at SHL4
To Be Published
8VWV
DownloadVisualize
BU of 8vwv by Molmil
OGG1 bound to a nucleosome containing 8oxoG at SHL4 (composite map)
Descriptor: 601 I strand (damaged strand), 601 J strand (non-damaged), Histone H2A type 1, ...
Authors:Weaver, T.M, Ling, J.A, Freudenthal, B.D.
Deposit date:2024-02-02
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:OGG1 bound to a nucleosome containing 8oxoG at SHL4 (composite map)
To Be Published
8W0P
DownloadVisualize
BU of 8w0p by Molmil
BsaXI -- Type IIB R-M system
Descriptor: RM.BsaXI, S-ADENOSYLMETHIONINE, S.BsaXI
Authors:Shen, B.W, Stoddard, B.L.
Deposit date:2024-02-13
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Atomic insights into the mechanism of DNA recognition and methylation by type IIB restriction-modification system: CryoEM structures of DNA free and cognate DNA bound BsaXI.
To Be Published
8W2P
DownloadVisualize
BU of 8w2p by Molmil
BsaXI-DNA complex I
Descriptor: CALCIUM ION, DNA (41-MER) Complementary strand of BsaXI DNA substrate, DNA (41-MER) Top strand of BsaXI cognate DNA substrate, ...
Authors:Shen, B.W, Stoddard, B.L, Xu, S.
Deposit date:2024-02-20
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural and biochemical analysis of subunit assembly, DNA recognition and cleavage by a Type IIB restriction-modification enzyme: BsaXI
To Be Published
8W2Q
DownloadVisualize
BU of 8w2q by Molmil
BsaXI-DNA complex II
Descriptor: DNA (41-MER), RM.BsaXI, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Shen, B.W, Stoddard, B.L, Xu, S.
Deposit date:2024-02-21
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural and biochemical analysis of subunit assembly, DNA recognition and cleavage by a Type IIB restriction-modification enzyme: BsaXI
To Be Published
8WGB
DownloadVisualize
BU of 8wgb by Molmil
mGlu2-4 heterodimer bound with Gi
Descriptor: (1R,2S)-2-[[3,5-bis(chloranyl)phenyl]carbamoyl]cyclohexane-1-carboxylic acid, GLUTAMIC ACID, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhang, Y, Liu, J.
Deposit date:2023-09-20
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of orientated asymmetry in a mGlu heterodimer
To Be Published
8WTL
DownloadVisualize
BU of 8wtl by Molmil
Crystal structure of Cas3-DExD+MG+ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR-associated helicase Cas3, MAGNESIUM ION
Authors:Mo, X.
Deposit date:2023-10-18
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structural insight into dynamic characteristic of the polymerized forms of kinetoplastid membrane protein-11
To be published
8WV0
DownloadVisualize
BU of 8wv0 by Molmil
Outer membrane porin of Burkholderia pseudomallei (BpsOmp38)
Descriptor: Outer membrane porin (Fragment)
Authors:Bunkum, P, Aunkham, A, Bert van den, B, Robinson, R.C, Suginta, W.
Deposit date:2023-10-22
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of outer membrane protein from Burkholderia pseudomallei (BpsOmp38)
To Be Published
8WV3
DownloadVisualize
BU of 8wv3 by Molmil
NUDIX hydrolase from Bacillus methanolicus
Descriptor: ADP-ribose pyrophosphatase, DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL
Authors:Ma, B.D, Kong, X.D.
Deposit date:2023-10-23
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:NUDIX hydrolase from Bacillus methanolicus
To Be Published
8WVR
DownloadVisualize
BU of 8wvr by Molmil
Complex structure of the azoxy synthase VlmB and its substrate
Descriptor: (2~{S})-2-(2-hexylhydrazinyl)-3-oxidanyl-propanoic acid, FE (III) ION, IMIDAZOLE, ...
Authors:Zang, X, Zhou, J.H, Yiling, D, Jingkun, S, Zhijie, Z, Zhuanglin, S, Guiyun, Z.
Deposit date:2023-10-24
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A conserved enzymatic route for azoxy bond formation in natural product biosynthesis
To Be Published
8WVS
DownloadVisualize
BU of 8wvs by Molmil
The structure of CPPCXC motif
Descriptor: SER-CYS-PRO-PRO-CYS-LYS-CYS-GLY-TRP
Authors:Fan, S.H, Wu, C.L.
Deposit date:2023-10-24
Release date:2024-10-30
Method:SOLUTION NMR
Cite:Combinations of Disulfide-Directing Motifs in Tandem Enabling the De-sign and Discovery of Multicyclic Peptide Binders
To Be Published
8WVU
DownloadVisualize
BU of 8wvu by Molmil
Cryo-EM structure of LGR4 in complex with Rspo1 and RNF43
Descriptor: E3 ubiquitin-protein ligase RNF43, Leucine-rich repeat-containing G-protein coupled receptor 4, R-spondin-1
Authors:Chang, Z, Lin, C.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Cryo-EM structure of LGR4 in complex with Rspo1 and RNF43
To Be Published
8WVV
DownloadVisualize
BU of 8wvv by Molmil
Cryo-EM structure of LGR4 in state I
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4
Authors:Lin, C, Chang, Z.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Cryo-EM structure of LGR4 in state I
To Be Published
8WVW
DownloadVisualize
BU of 8wvw by Molmil
Cryo-EM structure of LGR4 in state II
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4
Authors:Lin, C, Chang, Z.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Cryo-EM structure of LGR4 in state I
To Be Published
8WVX
DownloadVisualize
BU of 8wvx by Molmil
Cryo-EM structure of LGR4 in complex with Norrin(dimer)
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4, Norrin
Authors:Lin, C, Chang, Z.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structure of LGR4 in complex with Norrin (dimer)
To Be Published
8WVY
DownloadVisualize
BU of 8wvy by Molmil
Cryo-EM structure of LGR4 in complex with Norrin
Descriptor: Leucine-rich repeat-containing G-protein coupled receptor 4, Norrin
Authors:Lin, C, Chang, Z.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structure of LGR4 in complex with Norrin
To Be Published
8WVZ
DownloadVisualize
BU of 8wvz by Molmil
Structure of ADP-Form AsfvPrimPol Hexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (25-MER), DNA (5'-D(P*AP*AP*AP*A)-3'), ...
Authors:Shi, T.H, Guo, Y.Y, Yan, R.H.
Deposit date:2023-10-24
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structure of ADP-Form AsfvPrimPol Hexamer
To Be Published
8WW0
DownloadVisualize
BU of 8ww0 by Molmil
Cyclic peptide with affinity for ICOS
Descriptor: icos-1
Authors:Fan, S.H, Wu, C.L.
Deposit date:2023-10-24
Release date:2024-10-30
Method:SOLUTION NMR
Cite:Combinations of Disulfide-Directing Motifs in Tandem Enabling the De-sign and Discovery of Multicyclic Peptide Binders
To Be Published
8WW1
DownloadVisualize
BU of 8ww1 by Molmil
Cyclic peptide with affinity for HER3
Descriptor: HER3-1
Authors:Fan, S.H, Wu, C.L.
Deposit date:2023-10-24
Release date:2024-10-30
Method:SOLUTION NMR
Cite:Combinations of Disulfide-Directing Motifs in Tandem Enabling the De-sign and Discovery of Multicyclic Peptide Binders
To Be Published
8WWQ
DownloadVisualize
BU of 8wwq by Molmil
geniposidic acid O-methyltransferase complexed with SAH and geniposidic acid
Descriptor: 1,2-ETHANEDIOL, Geniposidic acid, MAGNESIUM ION, ...
Authors:Luo, Z, Li, L, Ma, D, Zhou, H.
Deposit date:2023-10-26
Release date:2024-10-30
Method:X-RAY DIFFRACTION (1.958 Å)
Cite:Structural insights into the substrate specificity of GAMT and divergence of seco-iridoid and closed-ring iridoid
To Be Published
8WX1
DownloadVisualize
BU of 8wx1 by Molmil
Cryo-EM structure of mouse SLC15A3 (outward-facing open)
Descriptor: Solute carrier family 15 member 3
Authors:Kasai, S, Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2023-10-27
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Cryo-EM structure of mouse SLC15A3 (outward-facing open)
To Be Published
8WXK
DownloadVisualize
BU of 8wxk by Molmil
Crystal Structure of UDP-Glucose 4-Epimerase (all4713) with UDP-glucose and NAD from Nostoc sp. PCC 7120
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Su, J.Y.
Deposit date:2023-10-30
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal Structure of UDP-Glucose 4-Epimerase (all4713) with UDP-glucose and NAD from Nostoc sp. PCC 7120
To Be Published

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon