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Legacy flatfile-incompatible PDB entries
7PDX
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BU of 7pdx by Molmil
Crystal structure of parent MAGE-A10 TCR (728)
Descriptor: CHLORIDE ION, PHOSPHATE ION, T-cell receptor alpha chain (TRAV/TRAC), ...
Authors:Simister, P.C, Border, E.C, Vieira, J.F, Pumphrey, N.J.
Deposit date:2021-08-09
Release date:2022-08-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural insights into engineering a T-cell receptor targeting MAGE-A10 with higher affinity and specificity for cancer immunotherapy.
J Immunother Cancer, 10, 2022
7PE1
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BU of 7pe1 by Molmil
Cryo-EM structure of BMV-derived VLP expressed in E. coli and assembled in the presence of tRNA (tVLP)
Descriptor: Coat protein
Authors:Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
Deposit date:2021-08-09
Release date:2022-03-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
7PE2
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BU of 7pe2 by Molmil
Cryo-EM structure of BMV-derived VLP expressed in E. coli (eVLP)
Descriptor: Coat protein
Authors:Ruszkowski, M, Strugala, A, Indyka, P, Urbanowicz, A.
Deposit date:2021-08-09
Release date:2022-03-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure.
Nanoscale, 14, 2022
7PE5
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BU of 7pe5 by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine-binding protein (Ls-AChBP) Q55R/M114V double mutant complexed with Triflumezopyrim
Descriptor: 4-oxidanylidene-1-(pyrimidin-5-ylmethyl)-3-[3-(trifluoromethyl)phenyl]pyrido[1,2-a]pyrimidin-1-ium-2-olate, Acetylcholine-binding protein
Authors:Montgomery, M.G.
Deposit date:2021-08-09
Release date:2022-02-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Biology-Guided Design, Synthesis, and Biological Evaluation of Novel Insect Nicotinic Acetylcholine Receptor Orthosteric Modulators.
J.Med.Chem., 65, 2022
7PE6
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BU of 7pe6 by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine-binding protein (Ls-AChBP) Q55R/M114V double mutant complexed with Flupyrimin
Descriptor: (~{N}~{E})-~{N}-[1-[(6-chloranylpyridin-3-yl)methyl]pyridin-2-ylidene]-2,2,2-tris(fluoranyl)ethanamide, Acetylcholine-binding protein
Authors:Montgomery, M.G.
Deposit date:2021-08-09
Release date:2022-02-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural Biology-Guided Design, Synthesis, and Biological Evaluation of Novel Insect Nicotinic Acetylcholine Receptor Orthosteric Modulators.
J.Med.Chem., 65, 2022
7PEH
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BU of 7peh by Molmil
Apo OXA-48 with fully carbamylated Lys73 at pH 7.5
Descriptor: 1-BUTANOL, Beta-lactamase
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-08-10
Release date:2022-08-24
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PEI
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BU of 7pei by Molmil
OXA-48_E185A/R186A/R206A with carbamylated Lys73 in complex with chloride ions at neutral pH
Descriptor: Beta-lactamase, GLYCEROL, SULFATE ION
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-08-10
Release date:2022-08-24
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PEP
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BU of 7pep by Molmil
Crystal Structure of a Class D Carbapenemase Complexed with Hydrolyzed Imipenem
Descriptor: (2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-ca rboxylic acid, 1-BUTANOL, BROMIDE ION, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-08-11
Release date:2022-08-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PEQ
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BU of 7peq by Molmil
Model of the outer rings of the human nuclear pore complex
Descriptor: Nuclear pore complex protein Nup107, Nuclear pore complex protein Nup133, Nuclear pore complex protein Nup160, ...
Authors:Schuller, A.P, Wojtynek, M, Mankus, D, Tatli, M, Kronenberg-Tenga, R, Regmi, S.G, Dasso, M, Weis, K, Medalia, O, Schwartz, T.U.
Deposit date:2021-08-11
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (35 Å)
Cite:The cellular environment shapes the nuclear pore complex architecture.
Nature, 598, 2021
7PFN
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BU of 7pfn by Molmil
Acetyllysine73-incorporated OXA-48 complexed with imipenem in both active and inactive acyl-enzyme intermediates
Descriptor: 1-BUTANOL, Beta-lactamase, Imipenem, ...
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-08-11
Release date:2022-08-24
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PFO
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BU of 7pfo by Molmil
Core human replisome
Descriptor: Cell division control protein 45 homolog, Claspin, DNA polymerase epsilon catalytic subunit A, ...
Authors:Jones, M.J, Yeeles, J.T.P.
Deposit date:2021-08-11
Release date:2021-11-10
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of a human replisome shows the organisation and interactions of a DNA replication machine.
Embo J., 40, 2021
7PGO
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BU of 7pgo by Molmil
OXA-48_R250A with carbamylated Lys73 with bromide ions bound at neutral pH
Descriptor: 1-BUTANOL, BROMIDE ION, Beta-lactamase
Authors:Zhou, Q, He, Y, Jin, Y.
Deposit date:2021-08-15
Release date:2022-08-24
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7PGX
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BU of 7pgx by Molmil
Structure of dark-adapted AsLOV2 wild type
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.001 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
7PGY
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BU of 7pgy by Molmil
Structure of light-adapted AsLOV2 wild type
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
7PGZ
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BU of 7pgz by Molmil
Structure of dark-adapted AsLOV2 Q513L
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
7PH0
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BU of 7ph0 by Molmil
Structure of light-adapted AsLOV2 Q513L
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Gelfert, R, Weyand, M, Moeglich, A.
Deposit date:2021-08-16
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.979 Å)
Cite:Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
7PH9
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BU of 7ph9 by Molmil
70S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-16
Release date:2022-05-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
7PHA
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BU of 7pha by Molmil
70S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-16
Release date:2022-05-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
7PHB
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BU of 7phb by Molmil
70S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-16
Release date:2022-05-25
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
7PHC
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BU of 7phc by Molmil
70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-16
Release date:2022-05-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (9.9 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
7PHM
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BU of 7phm by Molmil
Cryo-EM structure of Mycobacterium tuberculosis encapsulin
Descriptor: 29 kDa antigen CFP29
Authors:Woodward, J.D.
Deposit date:2021-08-17
Release date:2022-07-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Cryo-EM structure of Mycobacterium tuberculosis encapsulin
To Be Published
7PI1
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BU of 7pi1 by Molmil
Bacillus subtilis PabB
Descriptor: Aminodeoxychorismate synthase component 1, MAGNESIUM ION, TRYPTOPHAN
Authors:Rooms, L.D, Race, P.R.
Deposit date:2021-08-19
Release date:2022-09-07
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.729 Å)
Cite:Crystal structure of Bacillus subtilis PabB, component 1.
To be published
7PI4
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BU of 7pi4 by Molmil
FAK Protac GSK215 in complex with FAK and pVHL:ElonginC:ElonginB
Descriptor: (2S,4R)-4-hydroxy-1-((S)-2-(2-(4-(3-methoxy-4-((4-((2-(methylcarbamoyl)phenyl)amino)-5-(trifluoromethyl)pyridin-2-yl)amino)phenyl)piperazin-1-yl)acetamido)-3,3-dimethylbutanoyl)-N-((S)-1-(4-(4-methylthiazol-5-yl)phenyl)ethyl)pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Chung, C.
Deposit date:2021-08-19
Release date:2021-09-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Discovery and Characterisation of Highly Cooperative FAK-Degrading PROTACs.
Angew.Chem.Int.Ed.Engl., 60, 2021
7PI5
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BU of 7pi5 by Molmil
Unstacked stretched Dunaliella PSII
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
Authors:Caspy, I, Fadeeva, M, Mazor, Y, Nelson, N.
Deposit date:2021-08-19
Release date:2022-08-17
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structure of Dunaliella Photosystem II reveals conformational flexibility of stacked and unstacked supercomplexes.
Elife, 12, 2023
7PI8
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BU of 7pi8 by Molmil
70S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-19
Release date:2022-05-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022

240681

數據於2025-08-20公開中

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