Legacy flatfile-incompatible PDB entries

8URI	Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... Authors: Molodtsov, V, Wang, C, Ebright, R.H. Deposit date: 2023-10-26 Release date: 2024-05-29 Method: ELECTRON MICROSCOPY (5.3 Å) Cite: Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
8URV	Solution NMR structure of pro-IL-18 Descriptor: Interleukin-18 Authors: Bonin, J.P, Aramini, J.M, Kay, L.E. Deposit date: 2023-10-26 Release date: 2024-05-29 Method: SOLUTION NMR Cite: Structural transitions enable interleukin-18 maturation and signaling. Immunity, 2024
8URX	Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 30 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... Authors: Molodtsov, V, Wang, C, Ebright, R.H. Deposit date: 2023-10-27 Release date: 2024-05-29 Method: ELECTRON MICROSCOPY (6.6 Å) Cite: Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome Nat.Struct.Mol.Biol., 2024
8URY	Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ... Authors: Molodtsov, V, Wang, C, Ebright, R.H. Deposit date: 2023-10-27 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis of RfaH-mediated transcription-translation coupling Nat.Struct.Mol.Biol., 2024
8USQ	Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway Descriptor: DNA repair/transcription protein MET18/MMS19 Authors: Vasquez, S, Drennan, C.L. Deposit date: 2023-10-29 Release date: 2023-12-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (12.77 Å) Cite: Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway. Commun Biol, 6, 2023
8UTF	Structure of the Measles virus Fusion protein in the post-fusion conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0 Authors: Zyla, D, Saphire, E.O. Deposit date: 2023-10-31 Release date: 2024-07-03 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (2.73 Å) Cite: A neutralizing antibody prevents postfusion transition of measles virus fusion protein. Science, 384, 2024
8UU4	Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU5	Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU6	Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU7	Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU8	Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UU9	Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D) Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ... Authors: Seely, S.M, Basu, R.S, Gagnon, M.G. Deposit date: 2023-10-31 Release date: 2024-02-28 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Mechanistic insights into the alternative ribosome recycling by HflXr. Nucleic Acids Res., 52, 2024
8UXC	Structure of PKA phosphorylated human RyR2-R420Q in the primed state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (2.86 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXE	Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210 Descriptor: 4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid, ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXF	Structure of PKA phosphorylated human RyR2-R420W in the primed state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, Ryanodine receptor 2, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXG	Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210 Descriptor: 4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)-yl)methyl]benzoic acid, ADENOSINE-5'-TRIPHOSPHATE, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXH	Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.52 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXI	Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.29 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXL	Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium and calmodulin Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Calmodulin-1, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.12 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8UXM	Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium and calmodulin Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Calmodulin-1, ... Authors: Miotto, M.C, Marks, A.R. Deposit date: 2023-11-09 Release date: 2023-11-22 Method: ELECTRON MICROSCOPY (3.56 Å) Cite: Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders To Be Published
8V3D	AgamOR28 structure bound to 2,4,5-trimethylthiazole Descriptor: 2,4,5-trimethyl-1,3-thiazole, OR28, Odorant receptor Orco Authors: Zhao, J, del Marmol, J. Deposit date: 2023-11-27 Release date: 2024-06-19 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (2.95 Å) Cite: Structural basis of odor sensing by insect heteromeric odorant receptors. Science, 384, 2024
8V3L	Microtubule inner proteins in the 48-nm doublet microtubule from the proximal region of Tetrahymena thermophila strain K40R Descriptor: BMIP1, CCDC81B Authors: Legal, T, Bui, K.H. Deposit date: 2023-11-28 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: 48-nm doublet microtubule from the proximal region of Tetrahymena thermophila strain K40R To Be Published
8V4X	Structure of MALT1 in complex with an allosteric inhibitor Descriptor: Inhibitor peptide, Mucosa-associated lymphoid tissue lymphoma translocation protein 1, N-{7-[(1S)-1-methoxyethyl]-2-methyl[1,3]thiazolo[5,4-b]pyridin-6-yl}-N'-[6-(2H-1,2,3-triazol-2-yl)-5-(trifluoromethyl)pyridin-3-yl]urea Authors: Judge, R.A, Pappano, W.N. Deposit date: 2023-11-29 Release date: 2024-05-01 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.486 Å) Cite: Inhibition of MALT1 and BCL2 Induces Synergistic Antitumor Activity in Models of B-Cell Lymphoma. Mol.Cancer Ther., 23, 2024
8V5A	Prefusion-stabilized Respirovirus type 3 Fusion protein Descriptor: Camelid nanobody 4C06, Fusion glycoprotein F0 Authors: Johnson, N.V, McLellan, J.S. Deposit date: 2023-11-30 Release date: 2024-06-19 Method: ELECTRON MICROSCOPY (3 Å) Cite: Universal paramyxovirus vaccine design by stabilizing regions involved in structural transformation of the fusion protein. Nat Commun, 15, 2024
8V6P	Proteus vulgaris tryptophan indole-lyase complexed with 7-aza-L-tryptophan Descriptor: (2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-(1H-pyrrolo[2,3-b]pyridin-3-yl)propanoic acid, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-3-(1H-pyrrolo[2,3-b]pyridin-3-yl)-L-alanine, DIMETHYL SULFOXIDE, ... Authors: Phillips, R.S. Deposit date: 2023-12-02 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Proteus vulgaris tryptophan indole-lyase complexed with L-alanine To Be Published

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