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Legacy flatfile-incompatible PDB entries
7UIT
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BU of 7uit by Molmil
Cryo-EM of pH-controlled and self-assembled fibers, peptide 2
Descriptor: Peptide 2
Authors:Wang, F, Grosvirt-Dramen, A, Hochbaum, A.I, Egelman, E.H.
Deposit date:2022-03-29
Release date:2023-04-12
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM of pH-controlled and self-assembled fibers, peptide 2
To Be Published
7ULI
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BU of 7uli by Molmil
Apo HMG-CoA Reductase from Arabidopsis thaliana (HMG1)
Descriptor: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1
Authors:Haywood, J, Bond, C.S.
Deposit date:2022-04-05
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A fungal tolerance trait and selective inhibitors proffer HMG-CoA reductase as a herbicide mode-of-action.
Nat Commun, 13, 2022
7UMH
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BU of 7umh by Molmil
Energetic robustness to large scale structural dynamics in a photosynthetic supercomplex
Descriptor: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Harris, D, Toporik, H, Schlau-Cohen, G.S, Mazor, Y.
Deposit date:2022-04-07
Release date:2023-05-17
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Energetic robustness to large scale structural fluctuations in a photosynthetic supercomplex.
Nat Commun, 14, 2023
7UMJ
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BU of 7umj by Molmil
Crystal structure of recombinant Solieria filiformis lectin (rSfL)
Descriptor: Lectin SfL-1, SULFATE ION
Authors:Chaves, R.P, Bezerra, E.H.S, da Silva, F.M.S, Carneiro, R.F, Sampaio, A.H, Rocha, B.A.M, Nagano, C.S.
Deposit date:2022-04-07
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural study and antimicrobial and wound healing effects of lectin from Solieria filiformis (Kutzing) P.W.Gabrielson.
Biochimie, 214, 2023
7UMS
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BU of 7ums by Molmil
Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 in complex with antibody 41 - Upright conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fab 41 heavy chain, ...
Authors:Jenni, S, Zongli, L, Wang, Y, Bessey, T, Salgado, E.N, Schmidt, A.G, Greenberg, H.B, Jiang, B, Harrison, S.C.
Deposit date:2022-04-07
Release date:2022-07-27
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.
J.Virol., 96, 2022
7UMT
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BU of 7umt by Molmil
Structure of the VP5*/VP8* assembly from the human rotavirus strain CDC-9 - Reversed conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ...
Authors:Jenni, S, Zongli, L, Wang, Y, Bessey, T, Salgado, E.N, Schmidt, A.G, Greenberg, H.B, Jiang, B, Harrison, S.C.
Deposit date:2022-04-07
Release date:2022-07-27
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.
J.Virol., 96, 2022
7UMZ
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BU of 7umz by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of high Mg2+ and AMP-PCP in nanodisc
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Nayak, A.R, Samso, M.
Deposit date:2022-04-08
Release date:2023-04-12
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Interplay between Mg2+ and Ca2+ at multiple sites of the ryanodine receptor
Nat Commun, 15, 2024
7UN1
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BU of 7un1 by Molmil
8-nm repeat of the human sperm tip singlet microtubule
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Gui, M, Croft, J.T, Zabeo, D, Acharya, V, Kollman, J.M, Burgoyne, T, Hoog, J.L, Brown, A.
Deposit date:2022-04-08
Release date:2022-10-05
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (6 Å)
Cite:SPACA9 is a lumenal protein of human ciliary singlet and doublet microtubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UNC
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BU of 7unc by Molmil
Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Filipovski, M, Vos, S.M, Farnung, L.
Deposit date:2022-04-10
Release date:2022-10-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of nucleosome retention during transcription elongation.
Science, 376, 2022
7UND
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BU of 7und by Molmil
Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38)
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ...
Authors:Filipovski, M, Vos, S.M, Farnung, L.
Deposit date:2022-04-10
Release date:2022-10-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of nucleosome retention during transcription elongation.
Science, 376, 2022
7UNE
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BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
Descriptor: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7UNF
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BU of 7unf by Molmil
CryoEM structure of a mEAK7 bound human V-ATPase complex
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7UNG
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BU of 7ung by Molmil
48-nm repeat of the human respiratory doublet microtubule
Descriptor: Cilia- and flagella-associated protein 161, Cilia- and flagella-associated protein 20, Cilia- and flagella-associated protein 45, ...
Authors:Gui, M, Croft, J.T, Zabeo, D, Acharya, V, Kollman, J.M, Burgoyne, T, Hoog, J.L, Brown, A.
Deposit date:2022-04-11
Release date:2022-10-05
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:SPACA9 is a lumenal protein of human ciliary singlet and doublet microtubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UNR
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BU of 7unr by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Basu, R.S, Sherman, M.B, Gagnon, M.G.
Deposit date:2022-04-11
Release date:2022-06-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNU
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BU of 7unu by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Basu, R.S, Sherman, M.B, Gagnon, M.G.
Deposit date:2022-04-11
Release date:2022-06-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNV
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BU of 7unv by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Basu, R.S, Sherman, M.B, Gagnon, M.G.
Deposit date:2022-04-11
Release date:2022-06-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNW
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BU of 7unw by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Basu, R.S, Sherman, M.B, Gagnon, M.G.
Deposit date:2022-04-11
Release date:2022-06-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UOM
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BU of 7uom by Molmil
Endogenous dihydrolipoamide acetyltransferase (E2) core of pyruvate dehydrogenase complex from bovine kidney
Descriptor: Acetyltransferase component of pyruvate dehydrogenase complex
Authors:Liu, S, Xia, X, Zhen, J, Li, Z.H, Zhou, Z.H.
Deposit date:2022-04-13
Release date:2022-11-30
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures and comparison of endogenous 2-oxoglutarate and pyruvate dehydrogenase complexes from bovine kidney.
Cell Discov, 8, 2022
7UOO
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BU of 7uoo by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-13
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7UPA
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BU of 7upa by Molmil
Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 1H8 heavy chain, Fab 1H8 light chain, ...
Authors:Byrne, P.O, McLellan, J.S.
Deposit date:2022-04-14
Release date:2023-03-29
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for antibody recognition of vulnerable epitopes on Nipah virus F protein.
Nat Commun, 14, 2023
7UPH
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BU of 7uph by Molmil
Structure of a ribosome with tethered subunits
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C.
Deposit date:2022-04-15
Release date:2022-08-17
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Three-dimensional structure-guided evolution of a ribosome with tethered subunits.
Nat.Chem.Biol., 18, 2022
7UQB
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BU of 7uqb by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-19
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7UQU
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BU of 7uqu by Molmil
Crystal Structure of Mouse Cadherin-23 EC9
Descriptor: CALCIUM ION, Cadherin-23
Authors:Sandhu, J.S, De La Torre, P, Sotomayor, M.
Deposit date:2022-04-20
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.976 Å)
Cite:Crystal Structure of Mouse Cadherin-23 EC9
To be published
7UQZ
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BU of 7uqz by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-20
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7USA
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BU of 7usa by Molmil
Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the swung out conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-04-23
Release date:2022-08-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022

224931

数据于2024-09-11公开中

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