Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB形式変換不可の PDB エントリー
8RXR
DownloadVisualize
BU of 8rxr by Molmil
Crystal structure of VPS34 in complex with inhibitor SB02024
分子名称: 4-[(3R)-3-methylmorpholin-4-yl]-2-[(2R)-2-(trifluoromethyl)piperidin-1-yl]-3H-pyridin-6-one, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Tresaugues, L, Yu, Y, Bogdan, M, Parpal, S, Silvander, C, Lindstrom, J, Simeon, J, Timson, M.J, Al-Hashimi, H, Smith, B.D, Flynn, D.L, Viklund, J, Martinsson, J, De Milito, A, Andersson, M.
登録日2024-02-07
公開日2024-03-20
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Combining VPS34 inhibitors with STING agonists enhances type I interferon signaling and anti-tumor efficacy.
Mol Oncol, 18, 2024
8RXU
DownloadVisualize
BU of 8rxu by Molmil
Crystal structure of octaheme nitrite reductase from Trichlorobacter ammonificans in space group P21
分子名称: CALCIUM ION, HEME C, Octaheme nitrite reductase, ...
著者Polyakov, K.M, Safonova, T.N, Osipov, E, Popov, A.N, Tikhonova, T.V, Popov, V.O.
登録日2024-02-08
公開日2024-03-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.737 Å)
主引用文献Crystal structure of octaheme nitrite reductase from Trichlorobacter ammonificans in space group P21
To Be Published
8RXX
DownloadVisualize
BU of 8rxx by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
分子名称: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
著者Rajan, K.S, Yonath, A.
登録日2024-02-08
公開日2024-05-15
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8RYT
DownloadVisualize
BU of 8ryt by Molmil
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
分子名称: Nucleoprotein
著者Roske, Y, Mikirtumov, V, Daumke, O, Kudryashev, M, Dick, A.
登録日2024-02-09
公開日2024-06-19
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structural characterization of Thogoto Virus nucleoprotein provides insights into viral RNA encapsidation and RNP assembly.
Structure, 32, 2024
8RZB
DownloadVisualize
BU of 8rzb by Molmil
IL-1beta in complex with covalent DEL hit
分子名称: 8-[4-methyl-3-(trifluoromethyl)phenyl]-2-[[(7S)-7-(2-morpholin-4-ylethylcarbamoyl)-4-(phenylsulfonyl)-1,4-diazepan-1-yl]carbonyl]imidazo[1,2-a]pyridine-6-carboxylic acid, Interleukin-1 beta
著者Rondeau, J.-M, Lehmann, S.
登録日2024-02-12
公開日2024-05-22
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.836 Å)
主引用文献Ligandability Assessment of IL-1 beta by Integrated Hit Identification Approaches.
J.Med.Chem., 67, 2024
8RZC
DownloadVisualize
BU of 8rzc by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-imidazol-1-yl-benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RZD
DownloadVisualize
BU of 8rzd by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-(3-hydroxyphenyl)benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RZE
DownloadVisualize
BU of 8rze by Molmil
SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 10
分子名称: 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanylmethyl]-5-pyridin-3-yl-benzoic acid, ...
著者Kalnins, G.
登録日2024-02-12
公開日2024-02-21
最終更新日2024-10-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 nsp16 by substrate-based dual site inhibitors.
Chemmedchem, 2024
8RZG
DownloadVisualize
BU of 8rzg by Molmil
ZgGH129 from Zobellia galactanivorans soaked with the product of the reaction ADG (3,6-anhydro-D-galactose).
分子名称: (1~{R},4~{S},5~{R},8~{S})-2,6-dioxabicyclo[3.2.1]octane-4,8-diol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Roret, T, Czjzek, M, Ficko-Blean, E.
登録日2024-02-12
公開日2024-07-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 63, 2024
8RZH
DownloadVisualize
BU of 8rzh by Molmil
ZgGH129 from Zobellia galactanivorans in complex with the inhibitor AD-DGJ (3,6-anhydro-D-1-deoxygalactonojirimycin).
分子名称: (1~{R},4~{S},5~{R},8~{S})-6-oxa-2-azabicyclo[3.2.1]octane-4,8-diol, 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE, ...
著者Roret, T, Czjzek, M, Ficko-Blean, E.
登録日2024-02-12
公開日2024-07-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 63, 2024
8RZI
DownloadVisualize
BU of 8rzi by Molmil
ZgGH129 from Zobellia galactanivorans soaked with 1,2-diF-ADG (3,6-Anhydro-2-deoxy-2-fluoro-a-D-galactopyranosyl fluoride) resulting in a trapped glycosyl-enzyme intermediate.
分子名称: (1~{R},4~{S},5~{S},8~{S})-4-fluoranyl-2,6-dioxabicyclo[3.2.1]octan-8-ol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Roret, T, Czjzek, M, Ficko-Blean, E.
登録日2024-02-12
公開日2024-07-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 63, 2024
8RZJ
DownloadVisualize
BU of 8rzj by Molmil
ZgGH129 from Zobellia galactanivorans in complex with the inhibitor ADG-IF (3,6-anhydro-D-galacto-isofagomine).
分子名称: (1~{R},5~{R},8~{S})-6-oxa-3-azabicyclo[3.2.1]octan-8-ol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Roret, T, Czjzek, M, Ficko-Blean, E.
登録日2024-02-12
公開日2024-07-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation.
Angew.Chem.Int.Ed.Engl., 63, 2024
8RZW
DownloadVisualize
BU of 8rzw by Molmil
A fragment-based inhibitor of SHP2
分子名称: 3,5-bis(chloranyl)pyrazin-2-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8RZY
DownloadVisualize
BU of 8rzy by Molmil
A fragment-based inhibitor of SHP2
分子名称: 1H-pyrrolo[3,2-b]pyridin-5-amine, DIMETHYL SULFOXIDE, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S00
DownloadVisualize
BU of 8s00 by Molmil
CpKRS complexed with lysine and an inhibitor
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-oxidanyl-~{N}-[(1-oxidanylcyclohexyl)methyl]-4-oxidanylidene-chromene-2-carboxamide, GLYCEROL, ...
著者Dawson, A, Baragana, B, Caldwell, N.
登録日2024-02-13
公開日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cryptosporidium lysyl-tRNA synthetase inhibitors define the interplay between solubility and permeability required to achieve efficacy.
Sci Transl Med, 16, 2024
8S01
DownloadVisualize
BU of 8s01 by Molmil
A fragment-based inhibitor of SHP2
分子名称: 3-(4-chlorophenyl)-1H-pyrazole, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S04
DownloadVisualize
BU of 8s04 by Molmil
A fragment-based inhibitor of SHP2
分子名称: N-(1H-indol-7-yl)methanesulfonamide, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S06
DownloadVisualize
BU of 8s06 by Molmil
A fragment-based inhibitor of SHP2
分子名称: 1H-pyrrolo[3,2-b]pyridin-7-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S07
DownloadVisualize
BU of 8s07 by Molmil
A fragment-based inhibitor of SHP2
分子名称: 7-azanyl-N-pyridin-3-yl-3H-pyrrolo[3,2-b]pyridine-2-carboxamide, DIMETHYL SULFOXIDE, FORMIC ACID, ...
著者Cleasby, A, Price, A.
登録日2024-02-13
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S0A
DownloadVisualize
BU of 8s0a by Molmil
H. sapiens MCM2-7 hexamer bound to double stranded DNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (22-mer), ...
著者Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
登録日2024-02-13
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0B
DownloadVisualize
BU of 8s0b by Molmil
H. sapiens MCM bound to double stranded DNA and ORC6 as part of the MCM-ORC complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (45-mer), DNA replication licensing factor MCM2, ...
著者Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
登録日2024-02-13
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0D
DownloadVisualize
BU of 8s0d by Molmil
H. sapiens MCM bound to double stranded DNA and ORC1-6
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (58-mer), DNA replication licensing factor MCM2, ...
著者Greiwe, J.F, Weissmann, F, Diffley, J.F.X, Costa, A.
登録日2024-02-13
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献MCM Double Hexamer Loading Visualised with Human Proteins
Nature, 2024
8S0H
DownloadVisualize
BU of 8s0h by Molmil
A fragment-based inhibitor of SHP2
分子名称: 5-(aminomethyl)-N-(3-chloranyl-1-methyl-indol-7-yl)-1,3-dihydroisoindole-2-sulfonamide, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-14
公開日2024-03-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S0I
DownloadVisualize
BU of 8s0i by Molmil
A fragment-based inhibitor of SHP2
分子名称: 3-phenyl-1H-pyrrolo[3,2-b]pyridine, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-14
公開日2024-03-20
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.929 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
8S0J
DownloadVisualize
BU of 8s0j by Molmil
A fragment-based inhibitor of SHP2
分子名称: 3-[3-[2,3-bis(chloranyl)phenyl]-1H-pyrrolo[3,2-b]pyridin-6-yl]propan-1-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Cleasby, A, Price, A.
登録日2024-02-14
公開日2024-03-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon