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PDB形式変換不可の PDB エントリー
8Q2D
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Crystal structure of the E. coli PqiC Lipoprotein residues 17-187
分子名称: Intermembrane transport lipoprotein PqiC
著者Cooper, B.F, Knowles, T.J.
登録日2023-08-02
公開日2023-09-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献An octameric PqiC toroid stabilises the outer-membrane interaction of the PqiABC transport system.
Embo Rep., 25, 2024
8Q2M
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18mer DNA mimic Foldamer with an Aliphatic linker in complex with Sac7d V26A/M29A protein
分子名称: DNA mimic Foldamer, DNA-binding protein 7b
著者Deepak, D, Corvaglia, V, Wu, J, Huc, I.
登録日2023-08-02
公開日2023-08-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献18mer DNA mimic foldamer with Alphatic linker in complex with Sac7d wild protein.
To Be Published
8Q30
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BU of 8q30 by Molmil
Sulfolobus acidocaldarius AAP filament.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Isupov, M.N, Gaines, M, Daum, B, McLaren, M.
登録日2023-08-03
公開日2024-03-06
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献CryoEM reveals the structure of an archaeal pilus involved in twitching motility.
Nat Commun, 15, 2024
8Q36
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Structure of Nucleosome Core with a Bound Metallopeptide Conjugate (Foamy Virus GAG Peptide-Au[I] Compound)
分子名称: DNA (145-MER), GAG structural protein, Histone H2A type 1-B/E, ...
著者De Falco, L, Batchelor, L.K, Dyson, P.J, Davey, C.A.
登録日2023-08-03
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Viral peptide conjugates for metal-warhead delivery to chromatin.
Rsc Adv, 14, 2024
8Q3E
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High Resolution Structure of Nucleosome Core with Bound Foamy Virus GAG Peptide
分子名称: DNA (145-MER), GLY-GLY-TYR-ASN-LEU-ARG-PRO-ARG-THR-TYR-GLN-PRO-GLN-ARG-TYR-GLY-GLY-GLY, Histone H2A type 1-B/E, ...
著者De Falco, L, Batchelor, L.K, Dyson, P.J, Davey, C.A.
登録日2023-08-04
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.174 Å)
主引用文献Viral peptide conjugates for metal-warhead delivery to chromatin.
Rsc Adv, 14, 2024
8Q3M
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Structure of Nucleosome Core with a Bound Kaposi Sarcoma Associated Herpesvirus LANA Peptide Having a Methionine to Ornithine Substitution
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
著者De Falco, L, Batchelor, L.K, Dyson, P.J, Davey, C.A.
登録日2023-08-04
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Viral peptide conjugates for metal-warhead delivery to chromatin.
Rsc Adv, 14, 2024
8Q3O
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Bacterial transcription termination factor Rho + pppGpp
分子名称: MAGNESIUM ION, Transcription termination factor Rho, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
著者Said, N, Hilal, T, Wahl, M.C.
登録日2023-08-04
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3X
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Structure of Nucleosome Core with a Bound Metallopeptide Conjugate (Kaposi Sarcoma Associated Herpesvirus LANA Peptide-Au[I] Compound)
分子名称: 4-diphenylphosphanylbenzoic acid, DNA (145-MER), GOLD ION, ...
著者De Falco, L, Batchelor, L.K, Dyson, P.J, Davey, C.A.
登録日2023-08-04
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Viral peptide conjugates for metal-warhead delivery to chromatin.
Rsc Adv, 14, 2024
8Q4D
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BU of 8q4d by Molmil
IstA-IstB(E167Q) Strand Transfer Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (118-MER) / TIR-transferred strand, ...
著者de la Gandara, A, Spinola-Amilibia, M, Araujo-Bazan, L, Nunez-Ramirez, R, Berger, J.M, Arias-Palomo, E.
登録日2023-08-06
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Nature, 630, 2024
8Q4K
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Crystal structure of Borrelia burgdorferi BB0158
分子名称: S2 lipoprotein, SULFATE ION
著者Brangulis, K, Tars, K.
登録日2023-08-07
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of chromosomally encoded outer surface lipoprotein BB0158 from Borrelia burgdorferi sensu stricto.
Ticks Tick Borne Dis, 15, 2024
8Q5I
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BU of 8q5i by Molmil
Structure of Candida albicans 80S ribosome in complex with cephaeline
分子名称: 18S ribosomal RNA, 25S rRNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Atamas, A, Guskov, A, Yusupov, M.
登録日2023-08-09
公開日2023-09-13
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural characterization of cephaeline binding to the eukaryotic ribosome using Cryo-Electron Microscopy
Biopolym Cell, 2023
8Q62
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Early closed conformation of the g-tubulin ring complex
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Llorca, O, Serna, M, Fernandez-Leiro, R.
登録日2023-08-10
公開日2024-02-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Transition of human gamma-tubulin ring complex into a closed conformation during microtubule nucleation.
Science, 383, 2024
8Q6J
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BU of 8q6j by Molmil
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pertuzumab Fab heavy chain, Pertuzumab Fab light chain, ...
著者Ruedas, R, Vuillemot, R, Tubiana, T, Winter, J.M, Pieri, L, Arteni, A.A, Samson, C, Jonic, J, Mathieu, M, Bressanelli, S.
登録日2023-08-11
公開日2023-09-20
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and conformational variability of the HER2-trastuzumab-pertuzumab complex.
J.Struct.Biol., 216, 2024
8Q6T
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Helical reconstruction of the relaxed thick filament from FIB milled left ventricular mouse myofibrils
分子名称: Myosin binding protein C, cardiac, Myosin light chain 3, ...
著者Tamborrini, D, Raunser, S.
登録日2023-08-14
公開日2023-11-01
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Structure of the native myosin filament in the relaxed cardiac sarcomere.
Nature, 623, 2023
8Q7X
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Structure of the recycling U5 snRNP bound to chaperone CD2BP2 (State 4)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CD2 antigen cytoplasmic tail-binding protein 2, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Riabov Bassat, D, Plaschka, C, Vorlaender, M.K.
登録日2023-08-17
公開日2024-04-17
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of human U5 snRNP late biogenesis and recycling.
Nat.Struct.Mol.Biol., 31, 2024
8Q84
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BU of 8q84 by Molmil
Outer kinetochore Dam1 protomer dimer Ndc80-Nuf2 coiled-coil complex
分子名称: DASH complex subunit ASK1, DASH complex subunit DAD1, DASH complex subunit DAD2, ...
著者Muir, K.W, Barford, D.
登録日2023-08-17
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural mechanism of outer kinetochore Dam1-Ndc80 complex assembly on microtubules.
Science, 382, 2023
8QBT
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BU of 8qbt by Molmil
E. coli ApdP-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-25
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
8QBX
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BU of 8qbx by Molmil
Chimeric Adenovirus-derived dodecamer
分子名称: Penton protein
著者Buzas, D, Borucu, U, Bufton, J, Kapadalakere, S.Y, Toelzer, C.
登録日2023-08-25
公開日2023-12-27
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Engineering the ADDobody protein scaffold for generation of high-avidity ADDomer super-binders.
Structure, 32, 2024
8QC4
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M. tuberculosis salicylate synthase MbtI in complex with 5-(3-carboxyphenyl)furan-2-carboxylic acid
分子名称: 5-(3-carboxyphenyl)furan-2-carboxylic acid, GLYCEROL, SULFATE ION, ...
著者Mori, M, Villa, S, Meneghetti, F, Bellinzoni, M.
登録日2023-08-25
公開日2023-11-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.578 Å)
主引用文献Structural Study of a New MbtI-Inhibitor Complex: Towards an Optimized Model for Structure-Based Drug Discovery.
Pharmaceuticals, 16, 2023
8QCQ
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B. subtilis ApdA-stalled ribosomal complex
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Morici, M, Wilson, D.N.
登録日2023-08-28
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.
Nat Commun, 15, 2024
8QDO
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Crystal structure of the tegument protein UL82 (pp71) from Human Cytomegalovirus
分子名称: Protein pp71, TETRAETHYLENE GLYCOL
著者Bresch, I.P, Eberhage, J, Reubold, T.F, Eschenburg, S.
登録日2023-08-30
公開日2024-02-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the tegument protein UL82 (pp71) from human cytomegalovirus.
Protein Sci., 33, 2024
8QF2
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Beta-L-Arabinofurano-cyclitol Aziridines are Cysteine-directed Broad-spectrum Inhibitors and Activity-based Probes for Retaining Beta-L-arabinofuranosidases
分子名称: (1~{S},2~{S},3~{S},4~{R})-4-azanyl-3-(hydroxymethyl)cyclopentane-1,2-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Borlandelli, V, Offen, W.A, Moroz, O, Nin-Hill, A, McGregor, N, Binkhorst, L, Armstrong, Z, Ishiwata, A, Artola, M, Rovira, C, Davies, G.J, Overkleeft, H.
登録日2023-09-02
公開日2023-12-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献beta-l- Arabino furano-cyclitol Aziridines Are Covalent Broad-Spectrum Inhibitors and Activity-Based Probes for Retaining beta-l-Arabinofuranosidases.
Acs Chem.Biol., 18, 2023
8QFD
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UFL1 E3 ligase bound 60S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Makhlouf, L, Kulathu, Y, Zeqiraj, E.
登録日2023-09-04
公開日2024-02-21
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons.
Nature, 627, 2024
8QFY
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Crystal structure of high affinity TCR in complex with pHLA harbouring bacterial peptide
分子名称: ACETATE ION, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Pengelly, R.J, Robinson, R.A.
登録日2023-09-05
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献An HLA-E-targeted TCR bispecific molecule redirects T cell immunity against Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 121, 2024
8QHS
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Cryo-EM structure of the monocin tail-tube, MttP.
分子名称: Antigen A
著者Nadejda, S, Lichtenstein, R, Schlussel, S, Azulay, G, Borovok, I, Holdengraber, V, Elad, N, Wolf, S.G, Zalk, R, Zarivach, R, Frank, G.A, Herskovits, A.A.
登録日2023-09-10
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Tailocin cell factories
To Be Published

223532

件を2024-08-07に公開中

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