PDB形式変換不可の PDB エントリー

8BDA	IFTA complex in anterograde intraflagellar transport trains (Chlamydomonas reinhardtii) 分子名称: Intraflagellar transport particle protein 140, Intraflagellar transport protein 121, Intraflagellar transport protein 122 homolog, ... 著者 Lacey, S.E, Foster, H.E, Pigino, G. 登録日 2022-10-18 公開日 2023-01-11 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (20.7 Å) 主引用文献 The molecular structure of IFT-A and IFT-B in anterograde intraflagellar transport trains. Nat.Struct.Mol.Biol., 30, 2023
8BE3	Crystal structure of KRasG12V-Nanobody84 分子名称: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION, ... 著者 Fischer, B, Wohlkonig, A, Steyaert, J. 登録日 2022-10-21 公開日 2023-11-01 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Allosteric nanobodies to study the interactions between SOS1 and RAS. Nat Commun, 15, 2024
8BE4	Crystal structure of SOS1-KRasG12V-Nanobody14 分子名称: Isoform 2B of GTPase KRas, Nanobody14, Son of sevenless homolog 1 著者 Fischer, B, Wohlkonig, A, Steyaert, J. 登録日 2022-10-21 公開日 2023-11-01 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Allosteric nanobodies to study the interactions between SOS1 and RAS. Nat Commun, 15, 2024
8BE5	Crystal structure of SOS1-KRasG12V-Nanobody22-Nanobody75 分子名称: Isoform 2B of GTPase KRas, Nanobody22, Nanobody75, ... 著者 Fischer, B, Wohlkonig, A, Steyaert, J. 登録日 2022-10-21 公開日 2023-11-01 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (3.13 Å) 主引用文献 Allosteric nanobodies to study the interactions between SOS1 and RAS. Nat Commun, 15, 2024
8BF7	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-24 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.33 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BFL	Jumbo Phage phi-kp24 empty capsid hexamers 分子名称: Major head protein 著者 Ouyang, R. 登録日 2022-10-26 公開日 2022-12-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers. Nat Commun, 13, 2022
8BFP	Jumbo Phage phi-kp24 empty capsid pentamer hexamers 分子名称: Major head protein 著者 Ouyang, R. 登録日 2022-10-26 公開日 2022-12-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers. Nat Commun, 13, 2022
8BGB	Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans 分子名称: CITRATE ANION, Histidine kinase, SODIUM ION 著者 Becker, S. 登録日 2022-10-27 公開日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans To Be Published
8BGE	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-27 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.11 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BGH	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-27 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BGI	GABA-A receptor a5 homomer - a5V1 - Flumazenil 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit alpha-5, Pregnanolone, ... 著者 Miller, P.S, Malinauskas, T.M, Omari, K.E, Aricescu, A.R. 登録日 2022-10-27 公開日 2023-11-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 The molecular basis of drug selectivity for alpha 5 subunit-containing GABA A receptors. Nat.Struct.Mol.Biol., 30, 2023
8BH3	DNA-PK Ku80 mediated dimer bound to PAXX 分子名称: DNA (25-MER), DNA (26-MER), DNA (27-MER), ... 著者 Hardwick, S.W, Chaplin, A.K. 登録日 2022-10-28 公開日 2023-06-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.55 Å) 主引用文献 PAXX binding to the NHEJ machinery explains functional redundancy with XLF. Sci Adv, 9, 2023
8BH4	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-29 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.62 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHF	Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S11, ... 著者 Absmeier, E, Chandrasekaran, V, O'Reilly, F.J, Stowell, J.A.W, Rappsilber, J, Passmore, L.A. 登録日 2022-10-31 公開日 2023-09-06 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Modulation of GluA2-gamma 5 synaptic complex desensitization, polyamine block and antiepileptic perampanel inhibition by auxiliary subunit cornichon-2. Nat.Struct.Mol.Biol., 30, 2023
8BHJ	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-31 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.81 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHL	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-31 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.21 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHN	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-31 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHP	Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-10-31 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.37 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHU	Crystal Structure of SilF (Ag(I) form 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SILVER ION, SULFATE ION, ... 著者 Lithgo, R.M, Carr, S.B, Quigley, A.M, Scott, D.J. 登録日 2022-11-01 公開日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal Structure of SilF (apo form) To Be Published
8BHV	DNA-PK XLF mediated dimer bound to PAXX 分子名称: DNA (24-MER), DNA (26-MER), DNA (27-MER), ... 著者 Hardwick, S.W, Chaplin, A.K. 登録日 2022-11-01 公開日 2023-06-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (4.51 Å) 主引用文献 PAXX binding to the NHEJ machinery explains functional redundancy with XLF. Sci Adv, 9, 2023
8BHY	DNA-PK Ku80 mediated dimer bound to PAXX and XLF 分子名称: DNA (25-MER), DNA (26-MER), DNA (27-MER), ... 著者 Hardwick, S.W, Chaplin, A.K. 登録日 2022-11-01 公開日 2023-06-07 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (5.33 Å) 主引用文献 PAXX binding to the NHEJ machinery explains functional redundancy with XLF. Sci Adv, 9, 2023
8BI3	Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200W (crystal M200W#1) 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Sciuk, A, Ruszkowski, M, Jaskolski, M, Loch, J.I. 登録日 2022-11-01 公開日 2023-05-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.452 Å) 主引用文献 The effects of nature-inspired amino acid substitutions on structural and biochemical properties of the E. coli L-asparaginase EcAIII. Protein Sci., 32, 2023
8BIL	Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site. 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-11-02 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.04 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BIM	Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site 分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... 著者 Koziej, L, Glatt, S. 登録日 2022-11-02 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (2.04 Å) 主引用文献 Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BIP	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex 分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Knorr, A.G, Mackens-Kiani, T, Musial, J, Berninghausen, O, Becker, T, Beatrix, B, Beckmann, R. 登録日 2022-11-02 公開日 2023-02-08 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The dynamic architecture of Map1- and NatB-ribosome complexes coordinates the sequential modifications of nascent polypeptide chains. Plos Biol., 21, 2023

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