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PDB形式変換不可の PDB エントリー
7UVY
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A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVZ
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A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UW1
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A. baumannii 70S ribosome-Streptothricin-D complex
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UW9
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Citrus V-ATPase State 1, H in contact with subunit a
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
著者Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
登録日2022-05-03
公開日2022-07-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWA
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Citrus V-ATPase State 1, H in contact with subunits AB
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
著者Abdelaziz, R.A, Keon, K.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
登録日2022-05-03
公開日2022-07-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWB
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Citrus V-ATPase State 2, Highest-Resolution Class
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
著者Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
登録日2022-05-03
公開日2022-07-06
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWC
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Citrus V-ATPase State 2, H in contact with subunit a
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
著者Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
登録日2022-05-03
公開日2022-07-06
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWD
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Citrus V-ATPase State 2, H in contact with subunits AB
分子名称: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit, V-type proton ATPase subunit AP1 fragment, ...
著者Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
登録日2022-05-03
公開日2022-07-06
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UX3
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Asymmetric unit of AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes
分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ...
著者Hooy, R.M, Hurley, J.H.
登録日2022-05-04
公開日2023-05-10
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat.
Sci Adv, 8, 2022
7UXH
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cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Cui, Z, Hurley, J.
登録日2022-05-05
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the lysosomal mTORC1-TFEB-Rag-Ragulator megacomplex.
Nature, 614, 2023
7UXX
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Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal domain
分子名称: ACETATE ION, GLYCEROL, Nucleoprotein
著者Bezerra, E.H.S, Tonoli, C.C.C, Soprano, A.S, Franchini, K.G, Trivella, D.B.B, Benedetti, C.E.
登録日2022-05-06
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Discovery and structural characterization of chicoric acid as a SARS-CoV-2 nucleocapsid protein ligand and RNA binding disruptor.
Sci Rep, 12, 2022
7UXZ
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Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal domain complexed with Chicoric acid
分子名称: (2R,3R)-2,3-bis{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}butanedioic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Bezerra, E.H.S, Tonoli, C.C.C, Soprano, A.S, Franchini, K.G, Trivella, D.B.B, Benedetti, C.E.
登録日2022-05-06
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.733 Å)
主引用文献Discovery and structural characterization of chicoric acid as a SARS-CoV-2 nucleocapsid protein ligand and RNA binding disruptor.
Sci Rep, 12, 2022
7UZF
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BU of 7uzf by Molmil
Rat Kidney V-ATPase with SidK, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZG
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BU of 7uzg by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZH
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Rat Kidney V-ATPase with SidK, State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZI
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BU of 7uzi by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Rubinstein, J.L, Abbas, Y.M.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZJ
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BU of 7uzj by Molmil
Rat Kidney V1 complex with SidK and NCOA7B, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7UZK
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BU of 7uzk by Molmil
Rat Kidney V1 complex lacking subunit H with SidK and NCOA7B, State 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
著者Abbas, Y.M, Rubinstein, J.L.
登録日2022-05-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of V-ATPase with NCOA7B
To Be Published
7V08
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BU of 7v08 by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
著者Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
登録日2022-05-10
公開日2023-03-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7V0K
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Consensus refinement of human erythrocyte ankyrin-1 complex (Composite map)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ammonium transporter Rh type A, Ankyrin-1, ...
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-10
公開日2022-07-20
最終更新日2022-07-27
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
7V0T
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Local refinement of Band 3-I cytoplasmic domains, class 1 of erythrocyte ankyrin-1 complex
分子名称: Band 3 anion transport protein
著者Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B.
登録日2022-05-11
公開日2022-07-20
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Architecture of the human erythrocyte ankyrin-1 complex.
Nat.Struct.Mol.Biol., 29, 2022
7V3U
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Cryo-EM structure of MCM double hexamer with structured Mcm4-NSD
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ...
著者Cheng, J, Li, N, Huo, Y, Dang, S, Tye, B, Gao, N, Zhai, Y.
登録日2021-08-11
公開日2022-04-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Insight into the MCM double hexamer activation by Dbf4-Cdc7 kinase.
Nat Commun, 13, 2022
7V3V
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Cryo-EM structure of MCM double hexamer bound with DDK in State I
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 7, DDK kinase regulatory subunit DBF4, ...
著者Cheng, J, Li, N, Huo, Y, Dang, S, Tye, B, Gao, N, Zhai, Y.
登録日2021-08-11
公開日2022-04-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural Insight into the MCM double hexamer activation by Dbf4-Cdc7 kinase.
Nat Commun, 13, 2022
7V7H
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Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-08-21
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 1
To Be Published
7V7I
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Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D.
登録日2021-08-21
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), dimer of S trimer conformation 2
To Be Published

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件を2024-07-10に公開中

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