PDB形式変換不可の PDB エントリー

4V98	The 8S snRNP Assembly Intermediate 分子名称: CG10419, Icln, LD23602p, ... 著者 Grimm, C, Pelz, J.P, Schindelin, H, Diederichs, K, Kuper, J, Kisker, C. 登録日 2012-05-15 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural Basis of Assembly Chaperone- Mediated snRNP Formation. Mol.Cell, 49, 2013
4V99	The Crystallographic Structure of Panicum Mosaic Virus 分子名称: 5'-R(P*UP*UP*AP*AP*UP*AP*UP*UP*UP*UP*UP*AP*UP*UP*UP*UP*U)-3', CALCIUM ION, Capsid protein 著者 Makino, D.L, Larson, S.B, McPherson, A. 登録日 2012-07-04 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The crystallographic structure of Panicum Mosaic Virus (PMV). J.Struct.Biol., 181, 2013
4V9A	Crystal Structure of the 70S ribosome with tetracycline. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Jenner, L, Yusupov, M, Yusupova, G. 登録日 2012-07-18 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.2999 Å) 主引用文献 Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis. Proc.Natl.Acad.Sci.USA, 110, 2013
4V9B	Crystal Structure of the 70S ribosome with tigecycline. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Jenner, L, Yusupov, M, Yusupova, G. 登録日 2012-07-18 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis. Proc.Natl.Acad.Sci.USA, 110, 2013
4V9C	Allosteric control of the ribosome by small-molecule antibiotics 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Cate, J.H.D, Pulk, A, Blanchard, S.C, Wang, L, Feldman, M.B, Wasserman, M.R, Altman, R. 登録日 2012-07-25 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Allosteric control of the ribosome by small-molecule antibiotics. Nat.Struct.Mol.Biol., 19, 2012
4V9D	Structures of the bacterial ribosome in classical and hybrid states of tRNA binding 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Dunkle, J.A, Wang, L, Feldman, M.B, Pulk, A, Chen, V.B, Kapral, G.J, Noeske, J, Richardson, J.S, Blanchard, S.C, Cate, J.H.D. 登録日 2012-07-31 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structures of the bacterial ribosome in classical and hybrid states of tRNA binding. Science, 332, 2011
4V9E	Crystal Structure of Rift Valley Fever Virus Nucleocapsid Protein Hexamer Bound to Single-stranded RNA. 分子名称: 35-mer poly(U) RNA, Nucleocapsid protein 著者 Raymond, D.D, Smith, J.L. 登録日 2012-09-19 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Phleboviruses encapsidate their genomes by sequestering RNA bases. Proc.Natl.Acad.Sci.USA, 109, 2012
4V9F	The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins 分子名称: 23S Ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ... 著者 Gabdulkhakov, A. 登録日 2012-11-02 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 Revisiting the Haloarcula marismortui 50S ribosomal subunit model. Acta Crystallogr.,Sect.D, 69, 2013
4V9G	RC-LH1-PufX dimer complex from Rhodobacter sphaeroides 分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (II) ION, ... 著者 Qian, P, Papiz, M.Z, Jackson, P.J, Brindley, A.A, Ng, I.W, Olsen, J.D, Dickman, M.J, Bullough, P.A, Hunter, C.N. 登録日 2013-02-21 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (7.78 Å) 主引用文献 Three-Dimensional Structure of the Rhodobacter sphaeroides RC-LH1-PufX Complex: Dimerization and Quinone Channels Promoted by PufX. Biochemistry, 52, 2013
4V9H	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Tourigny, D.S, Fernandez, I.S, Kelley, A.C, Ramakrishnan, V. 登録日 2013-03-25 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (2.857 Å) 主引用文献 Elongation factor G bound to the ribosome in an intermediate state of translocation. Science, 340, 2013
4V9I	Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S Ribosomal protein S10, ... 著者 Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V. 登録日 2013-04-04 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Unusual base pairing during the decoding of a stop codon by the ribosome. Nature, 500, 2013
4V9J	70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-23 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.86 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4V9K	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-24 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4V9L	70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-24 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4V9M	70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-25 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4V9N	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. 分子名称: 16S rRNA (1504-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Santos, N, Zhu, J, Donohue, J.P, Korostelev, A.A, Noller, H.F. 登録日 2013-04-26 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2. Structure, 21, 2013
4V9O	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
4V9P	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
4V9Q	Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Ling, C, Ermolenko, D.N, Korostelev, A.A. 登録日 2013-06-12 公開日 2014-07-09 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome. Proc.Natl.Acad.Sci.USA, 110, 2013
4V9R	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Bulkley, D.P, Brandi, L, Polikanov, Y.S, Fabbretti, A, O'Connor, M, Gualerzi, C.O, Steitz, T.A. 登録日 2013-12-05 公開日 2014-07-09 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation. Cell Rep, 6, 2014
4V9S	Crystal structure of antibiotic GE82832 bound to 70S ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Bulkley, D.P, Brandi, L, Polikanov, Y.S, Fabbretti, A, O'Connor, M, Gualerzi, C.O, Steitz, T.A. 登録日 2013-12-05 公開日 2014-07-09 最終更新日 2018-06-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The antibiotics dityromycin and GE82832 bind protein S12 and block EF-G-catalyzed translocation. Cell Rep, 6, 2014
4W29	70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2014-07-02 公開日 2014-10-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 How the ribosome hands the A-site tRNA to the P site during EF-G-catalyzed translocation. Science, 345, 2014
4W2E	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Gagnon, M.G, Lin, J, Steitz, T.A. 登録日 2014-06-04 公開日 2014-10-01 最終更新日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal structure of elongation factor 4 bound to a clockwise ratcheted ribosome. Science, 345, 2014
4W2F	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Polikanov, Y.S, Osterman, I.A, Szal, T, Tashlitsky, V.N, Serebryakova, M.V, Kusochek, P, Bulkley, D, Malanicheva, I.A, Efimenko, T.A, Efremenkova, O.V, Konevega, A.L, Shaw, K.J, Bogdanov, A.A, Rodnina, M.V, Dontsova, O.A, Mankin, A.S, Steitz, T.A, Sergiev, P.V. 登録日 2014-09-12 公開日 2014-10-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome. Mol.Cell, 56, 2014
4W2G	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ... 著者 Polikanov, Y.S, Osterman, I.A, Szal, T, Tashlitsky, V.N, Serebryakova, M.V, Kusochek, P, Bulkley, D, Malanicheva, I.A, Efimenko, T.A, Efremenkova, O.V, Konevega, A.L, Shaw, K.J, Bogdanov, A.A, Rodnina, M.V, Dontsova, O.A, Mankin, A.S, Steitz, T.A, Sergiev, P.V. 登録日 2014-09-12 公開日 2014-10-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome. Mol.Cell, 56, 2014

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