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Legacy flatfile-incompatible PDB entries
8AGV
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BU of 8agv by Molmil
Yeast RQC complex in state H
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Tesina, P, Buschauer, R, Beckmann, R.
Deposit date:2022-07-20
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
8AGW
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BU of 8agw by Molmil
Yeast RQC complex in state D
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Tesina, P, Buschauer, R, Beckmann, R.
Deposit date:2022-07-20
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
8AGX
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Yeast RQC complex in state with the RING domain of Ltn1 in the IN position
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Tesina, P, Buschauer, R, Beckmann, R.
Deposit date:2022-07-20
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
8AGZ
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BU of 8agz by Molmil
Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Tesina, P, Buschauer, R, Beckmann, R.
Deposit date:2022-07-20
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control.
Mol.Cell, 83, 2023
8AH0
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BU of 8ah0 by Molmil
BK Polyomavirus VP1 mutant VQQ
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AH1
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BU of 8ah1 by Molmil
BK Polyomavirus VP1 mutant N-Q
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AIJ
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BU of 8aij by Molmil
STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PAO1 IN COMPLEX WITH N-(alpha-L-Fucopyranosyl)benzamide (6)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Fucose-binding lectin PA-IIL, ...
Authors:Meiers, J, Mala, P, Varrot, A, Siebs, E, Imberty, A, Titz, A.
Deposit date:2022-07-26
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of N -beta-l-Fucosyl Amides as High-Affinity Ligands for the Pseudomonas aeruginosa Lectin LecB.
J.Med.Chem., 65, 2022
8AIQ
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BU of 8aiq by Molmil
Mpro of SARS COV-2 in complex with the MG-87 inhibitor
Descriptor: CHLORIDE ION, Replicase polyprotein 1ab, ~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{S},3~{R})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-3-cyclopropyl-1-oxidanylidene-propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-07-27
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Main Protease SARS-COV-2 in complex with the inhibitor MG-87
To Be Published
8AIU
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BU of 8aiu by Molmil
Mpro of SARS COV-2 in complex with the MG-97 inhibitor
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION, tert-butyl N-[1-[(2S)-3-cyclopropyl-1-[[(2S,3R)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-07-27
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Main Protease SARS-COV-2 in complex with the inhibitor MG-97
To Be Published
8AIV
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BU of 8aiv by Molmil
Mpro of SARS COV-2 in complex with the MG-100 inhibitor
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION, tert-butyl N-[1-[(2S)-3-cyclopropyl-1-[[(2S,3R)-4-(methylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-07-27
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Main Protease SARS-COV-2 in complex with the inhibitor MG-100
To Be Published
8AIY
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BU of 8aiy by Molmil
STRUCTURE OF THE LECB LECTIN FROM PSEUDOMONAS AERUGINOSA STRAIN PAO1 IN COMPLEX WITH N-(beta-L-Fucopyranosyl)-biphenyl-3-carboxamide (4i)
Descriptor: CALCIUM ION, Fucose-binding lectin PA-IIL, N-(beta-L-Fucopyranosyl)-biphenyl-3-carboxamide, ...
Authors:Meiers, J, Mala, P, Varrot, A, Siebs, E, Imberty, A, Titz, A.
Deposit date:2022-07-27
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of N -beta-l-Fucosyl Amides as High-Affinity Ligands for the Pseudomonas aeruginosa Lectin LecB.
J.Med.Chem., 65, 2022
8AIZ
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BU of 8aiz by Molmil
Mpro of SARS-CoV-2 in complex with the RK-68 inhibitor
Descriptor: (2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[2-oxidanylidene-3-(2-phenylethanoylamino)pyridin-1-yl]propanoyl]amino]-~{N}-methyl-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butanamide, CHLORIDE ION, Replicase polyprotein 1ab
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-07-27
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Main Protease SARS-CoV-2 in complex with the inhibitor RK-68
To Be Published
8AJ0
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BU of 8aj0 by Molmil
Mpro of SARS COV-2 in complex with the RK-90 inhibitor
Descriptor: (2R,3S)-3-[[(2S)-3-cyclopropyl-2-[2-oxidanylidene-3-(3-phenylpropanoylamino)pyridin-1-yl]propanoyl]amino]-N-methyl-2-oxidanyl-4-[(3S)-2-oxidanylidenepyrrolidin-3-yl]butanamide, 3C-like proteinase nsp5, CHLORIDE ION, ...
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-07-27
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.519 Å)
Cite:Main Protease SARS-COV-2 in complex with the inhibitor RK-90
To Be Published
8AJ4
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BU of 8aj4 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(malt)2] (Structure A')
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8,8-bis($l^{1}-oxidanyl)-2,2'-dimethyl-8,8'-spirobi[3$l^{4},7,9-trioxa-8$l^{6}-vanadabicyclo[4.3.0]nona-1(6),2,4-triene], Lysozyme, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2022-07-27
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Multiple and Variable Binding of Pharmacologically Active Bis(maltolato)oxidovanadium(IV) to Lysozyme.
Inorg.Chem., 61, 2022
8AJ5
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BU of 8aj5 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(malt)2] (Structure B)
Descriptor: ACETATE ION, Lysozyme, NITRATE ION, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2022-07-27
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Multiple and Variable Binding of Pharmacologically Active Bis(maltolato)oxidovanadium(IV) to Lysozyme.
Inorg.Chem., 61, 2022
8AJL
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BU of 8ajl by Molmil
Structure of the Ancestral Scaffold Antigen-6 of Coronavirus Spike protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
Authors:Hueting, D, Schriever, K, Wallden, K, Andrell, J, Syren, P.O.
Deposit date:2022-07-28
Release date:2023-08-16
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Design, structure and plasma binding of ancestral beta-CoV scaffold antigens.
Nat Commun, 14, 2023
8AJS
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BU of 8ajs by Molmil
Crystal structure of the F324A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
Descriptor: ADENOSINE, Adenosylhomocysteinase, CHLORIDE ION, ...
Authors:Drozdzal, P, Wozniak, K, Malecki, P, Gawel, M, Komorowska, M, Brzezinski, K.
Deposit date:2022-07-28
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of the F324A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
To Be Published
8AJT
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BU of 8ajt by Molmil
Crystal structure of the H323A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE, Adenosylhomocysteinase, ...
Authors:Drozdzal, P, Wozniak, K, Malecki, P, Gawel, M, Komorowska, M, Brzezinski, K.
Deposit date:2022-07-28
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Crystal structure of the H323A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
To Be Published
8AJU
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BU of 8aju by Molmil
Crystal structure of the Q65A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
Descriptor: ADENOSINE, Adenosylhomocysteinase, GLYCEROL, ...
Authors:Drozdzal, P, Wozniak, K, Malecki, P, Gawel, M, Komorowska, M, Brzezinski, K.
Deposit date:2022-07-28
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.645 Å)
Cite:Crystal structure of the Q65A mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
To Be Published
8AJV
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BU of 8ajv by Molmil
Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa crystallized in the presence of K+ cations
Descriptor: Adenosylhomocysteinase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Drozdzal, P, Wozniak, K, Malecki, P, Gawel, M, Komorowska, M, Brzezinski, K.
Deposit date:2022-07-28
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa crystallized in the presence of K+ cations
To Be Published
8AJW
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BU of 8ajw by Molmil
Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
Descriptor: ADENOSINE, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Drozdzal, P, Wozniak, K, Malecki, P, Gawel, M, Komorowska, M, Brzezinski, K.
Deposit date:2022-07-28
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.819 Å)
Cite:Crystal structure of the Q65N mutant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa cocrystallized with adenosine in the presence of K+ cations
To Be Published
8AKN
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BU of 8akn by Molmil
Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosome
Descriptor: 16S ribosomal RNA, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 23S ribosomal RNA, ...
Authors:Koller, T.O, Morici, M, Wilson, D.N.
Deposit date:2022-07-30
Release date:2023-03-08
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structural basis for translation inhibition by the glycosylated drosocin peptide.
Nat.Chem.Biol., 19, 2023
8AKQ
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BU of 8akq by Molmil
180 A SynPspA rod after incubation with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
Authors:Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
Deposit date:2022-07-31
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKS
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BU of 8aks by Molmil
215 A SynPspA rod after incubation with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
Authors:Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
Deposit date:2022-07-31
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Non-canonical ATPase activity drives PspA membrane constriction
To Be Published
8AKT
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BU of 8akt by Molmil
235 A SynPspA rod after incubation with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chloroplast membrane-associated 30 kD protein
Authors:Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
Deposit date:2022-07-31
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Non-canonical ATPase activity drives PspA membrane constriction
To Be Published

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PDB entries from 2024-07-10

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