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- PDB-7rlv: Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRADGQPA -

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Basic information

Entry
Database: PDB / ID: 7rlv
TitleAntibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRADGQPA
Components
  • 2F2 Fab heavy chain
  • 2F2 Fab light chain
  • peptide from Circumsporozoite protein variant VK210
KeywordsANTIMICROBIAL PROTEIN / antibody / malaria / Plasmodium vivax / circumsporozoite protein
Function / homology
Function and homology information


side of membrane / cell surface / plasma membrane / cytoplasm
Similarity search - Function
Plasmodium circumsporozoite protein / Thrombospondin type 1 domain / Thrombospondin type-1 (TSP1) repeat superfamily / Thrombospondin type-1 (TSP1) repeat profile. / Thrombospondin type 1 repeats / Thrombospondin type-1 (TSP1) repeat
Similarity search - Domain/homology
Circumsporozoite protein
Similarity search - Component
Biological speciesMus musculus (house mouse)
Plasmodium vivax (malaria parasite P. vivax)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.2 Å
AuthorsKucharska, I. / Julien, J.P.
Funding support Canada, 4items
OrganizationGrant numberCountry
Other governmentOntario Early Researcher Awards program Canada
Other governmentCanada Foundation for Innovation Canada
Other governmentOntario Research Fund Canada
Other governmentCanada Research Chairs Canada
CitationJournal: Elife / Year: 2022
Title: Structural basis of Plasmodium vivax inhibition by antibodies binding to the circumsporozoite protein repeats.
Authors: Kucharska, I. / Hossain, L. / Ivanochko, D. / Yang, Q. / Rubinstein, J.L. / Pomes, R. / Julien, J.P.
History
DepositionJul 26, 2021Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jan 26, 2022Provider: repository / Type: Initial release
Revision 1.1Oct 18, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
B: 2F2 Fab light chain
P: peptide from Circumsporozoite protein variant VK210
A: 2F2 Fab heavy chain
D: 2F2 Fab light chain
R: peptide from Circumsporozoite protein variant VK210
C: 2F2 Fab heavy chain
F: 2F2 Fab light chain
Q: peptide from Circumsporozoite protein variant VK210
E: 2F2 Fab heavy chain
hetero molecules


Theoretical massNumber of molelcules
Total (without water)150,63315
Polymers150,2609
Non-polymers3726
Water7,800433
1
B: 2F2 Fab light chain
P: peptide from Circumsporozoite protein variant VK210
A: 2F2 Fab heavy chain


Theoretical massNumber of molelcules
Total (without water)50,0873
Polymers50,0873
Non-polymers00
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
2
D: 2F2 Fab light chain
R: peptide from Circumsporozoite protein variant VK210
C: 2F2 Fab heavy chain
hetero molecules


Theoretical massNumber of molelcules
Total (without water)50,2736
Polymers50,0873
Non-polymers1863
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
3
F: 2F2 Fab light chain
Q: peptide from Circumsporozoite protein variant VK210
E: 2F2 Fab heavy chain
hetero molecules


Theoretical massNumber of molelcules
Total (without water)50,2736
Polymers50,0873
Non-polymers1863
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)71.487, 81.425, 82.263
Angle α, β, γ (deg.)94.588, 114.097, 111.599
Int Tables number1
Space group name H-MP1
Space group name HallP1
Symmetry operation#1: x,y,z
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
d_1ens_1(chain "A" and (resid 3 through 84 or (resid 85...
d_2ens_1(chain "C" and (resid 3 through 98 or (resid 99...
d_3ens_1(chain "E" and (resid 3 through 84 or (resid 85...
d_1ens_2(chain "B" and (resid 1 through 113 or resid 115...
d_2ens_2(chain "D" and (resid 1 through 14 or (resid 15...
d_3ens_2(chain "F" and (resid 1 through 14 or (resid 15...
d_1ens_3chain "P"
d_2ens_3(chain "Q" and resid 2 through 13)
d_3ens_3chain "R"

NCS domain segments:
Dom-IDComponent-IDEns-IDBeg label comp-IDEnd label comp-IDLabel asym-IDLabel seq-ID
d_11ens_1GLNTYRC1 - 175
d_12ens_1LEULEUC177
d_13ens_1SERLEUC179 - 188
d_14ens_1THRGLUC192 - 211
d_21ens_1GLNPROF1 - 132
d_22ens_1GLYTYRF134 - 176
d_23ens_1LEULEUF178
d_24ens_1SERGLUF180 - 209
d_31ens_1GLNPROL1 - 132
d_32ens_1GLYTYRL140 - 182
d_33ens_1LEULEUL184
d_34ens_1SERLEUL186 - 195
d_35ens_1THRGLUL199 - 218
d_11ens_2ASPPROA1 - 118
d_12ens_2VALARGA120 - 216
d_21ens_2ASPPROD1 - 118
d_22ens_2VALARGD120 - 216
d_31ens_2ASPPROI1 - 118
d_32ens_2VALARGI120 - 216
d_11ens_3ASPALAB1 - 12
d_21ens_3ASPALAK1 - 12
d_31ens_3ASPALAE1 - 12

NCS ensembles :
ID
ens_1
ens_2
ens_3

NCS oper:
IDCodeMatrixVector
1given(-0.452849828768, 0.783006417051, -0.426412925979), (-0.63478192484, 0.0526914160729, 0.770892679021), (0.626082215433, 0.619777835623, 0.473177021832)9.64762959177, -52.5137849717, -0.784492889945
2given(-0.544812708341, -0.607535578616, 0.577996222778), (0.707366126587, 0.0372102381195, 0.705867240447), (-0.450346839432, 0.793420392286, 0.409477478402)3.48935615697, -83.8432999971, 47.0742409415
3given(-0.461469808644, 0.776897081671, -0.428341616238), (-0.643335984702, 0.0394088076872, 0.764569000591), (0.610871857674, 0.628393085869, 0.481619874106)9.78157542312, -52.3210242676, -0.831104815025
4given(-0.535553901872, -0.626211154448, 0.566605337281), (0.696889319135, 0.0512549136627, 0.715344819441), (-0.476998212853, 0.777966916951, 0.408950096056)3.7703100829, -83.8061559353, 47.1550713883
5given(-0.554323614613, -0.597041533046, 0.579885107672), (0.720414879687, 0.0047285521076, 0.693527246704), (-0.41680658753, 0.802196390301, 0.427496456102)4.00084091931, -83.6623440668, 46.1895097831
6given(-0.461905702633, 0.7759672457, -0.429555532469), (-0.606754974424, 0.0767922162507, 0.791170876951), (0.646909207607, 0.626081295938, 0.435351223715)9.85960955879, -53.2642732234, -0.950095654384

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Components

#1: Antibody 2F2 Fab light chain


Mass: 24284.227 Da / Num. of mol.: 3
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Production host: Homo sapiens (human)
#2: Protein/peptide peptide from Circumsporozoite protein variant VK210 / CS


Mass: 1755.760 Da / Num. of mol.: 3 / Source method: obtained synthetically
Source: (synth.) Plasmodium vivax (malaria parasite P. vivax)
References: UniProt: P08677
#3: Antibody 2F2 Fab heavy chain


Mass: 24046.723 Da / Num. of mol.: 3
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Production host: Homo sapiens (human)
#4: Chemical
ChemComp-EDO / 1,2-ETHANEDIOL / ETHYLENE GLYCOL


Mass: 62.068 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C2H6O2
#5: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 433 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestN

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.6 Å3/Da / Density % sol: 52.75 %
Crystal growTemperature: 295 K / Method: vapor diffusion, sitting drop / Details: 0.2 M di-sodium tartrate and 20% (w/v) PEG 3350

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Data collection

DiffractionMean temperature: 80 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 23-ID-D / Wavelength: 1.033167 Å
DetectorType: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Oct 17, 2020
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.033167 Å / Relative weight: 1
ReflectionResolution: 2.2→29.48 Å / Num. obs: 75088 / % possible obs: 97.5 % / Redundancy: 3.5 % / Biso Wilson estimate: 39.06 Å2 / CC1/2: 0.965 / Net I/σ(I): 5.2
Reflection shellResolution: 2.2→2.25 Å / Redundancy: 3.1 % / Mean I/σ(I) obs: 1.5 / Num. unique obs: 4440 / CC1/2: 0.527 / % possible all: 97.1

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Processing

Software
NameVersionClassification
PHENIX1.19.2_4158refinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 1xiw
Resolution: 2.2→29.48 Å / SU ML: 0.2775 / Cross valid method: FREE R-VALUE / σ(F): 1.96 / Phase error: 22.1797
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2202 3731 5 %
Rwork0.1793 70941 -
obs0.1814 74672 97.05 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 45.68 Å2
Refinement stepCycle: LAST / Resolution: 2.2→29.48 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms10114 0 24 433 10571
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.006910389
X-RAY DIFFRACTIONf_angle_d0.866514123
X-RAY DIFFRACTIONf_chiral_restr0.05441583
X-RAY DIFFRACTIONf_plane_restr0.00591798
X-RAY DIFFRACTIONf_dihedral_angle_d11.85843692
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDRefine-IDTypeRms dev position (Å)
ens_1d_2CX-RAY DIFFRACTIONTorsion NCS0.452720898029
ens_1d_3CX-RAY DIFFRACTIONTorsion NCS0.549441306633
ens_2d_2AX-RAY DIFFRACTIONTorsion NCS0.420505475008
ens_2d_3AX-RAY DIFFRACTIONTorsion NCS0.525328695667
ens_3d_2BX-RAY DIFFRACTIONTorsion NCS1.02036463947
ens_3d_3BX-RAY DIFFRACTIONTorsion NCS0.483947548139
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.2-2.230.29061400.2352698X-RAY DIFFRACTION96.83
2.23-2.260.28711380.23572580X-RAY DIFFRACTION97.07
2.26-2.290.30121290.22852650X-RAY DIFFRACTION96.93
2.29-2.320.2891320.23012606X-RAY DIFFRACTION96.58
2.32-2.360.25821400.22692599X-RAY DIFFRACTION96.99
2.36-2.390.25051530.21342666X-RAY DIFFRACTION97.21
2.39-2.430.29751240.21742591X-RAY DIFFRACTION97.35
2.43-2.470.29391460.21542696X-RAY DIFFRACTION97.56
2.47-2.520.25471380.20722581X-RAY DIFFRACTION97.21
2.52-2.570.26081440.20892635X-RAY DIFFRACTION97.03
2.57-2.620.27751380.20682634X-RAY DIFFRACTION96.79
2.62-2.680.25341410.21182571X-RAY DIFFRACTION96.27
2.68-2.740.26941320.22042627X-RAY DIFFRACTION96.43
2.74-2.810.26411320.18772625X-RAY DIFFRACTION96.47
2.81-2.880.23471410.19892582X-RAY DIFFRACTION95.88
2.88-2.970.24871390.19422588X-RAY DIFFRACTION95.79
2.97-3.060.23311330.19262584X-RAY DIFFRACTION96.28
3.06-3.170.23681300.19882660X-RAY DIFFRACTION97.28
3.17-3.30.24551450.20062644X-RAY DIFFRACTION97.79
3.3-3.450.23551400.19222642X-RAY DIFFRACTION97.58
3.45-3.630.19721420.17422622X-RAY DIFFRACTION97.32
3.63-3.860.18321350.16652634X-RAY DIFFRACTION97.26
3.86-4.150.19861410.16012636X-RAY DIFFRACTION97.3
4.15-4.570.17481400.132668X-RAY DIFFRACTION97.87
4.57-5.230.18841340.12992656X-RAY DIFFRACTION98.41
5.23-6.580.17521410.16512634X-RAY DIFFRACTION97.61
6.58-29.480.19331430.16912632X-RAY DIFFRACTION97.4
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
11.26586323651-0.161159128263-0.08450960118540.423130239022-0.8151198338562.12019378249-0.303550415190.584441879799-0.23665911365-0.5916228515780.4142243844140.4946905442190.288782748196-0.163335533774-0.1063996970970.88062590499-0.29127424413-0.2314957662440.631733659383-0.04162384754260.411643116243.02264389893-2.173082393312.0520204571
20.6715194804540.614766801836-0.4407159529332.01271015492-0.9170232138240.70222746501-0.145019267090.1504538472960.086578014144-0.3245472091510.1112041489460.08427623276710.222336089241-0.05835845075510.03835946929460.451275746514-0.0434642261443-0.1094397675020.370543406358-0.08112355378960.3512767421355.8592607118-5.3005054618331.334616365
32.477860567380.517269060792-0.2147789727665.138205728791.647224133678.94632501689-0.102800366877-0.0180270615125-0.1817978751510.168722357771-0.00766970489140.2674252216760.0168053812282-0.08344491673420.1154905057410.326601045161-0.0290009044934-0.03043354985720.233659051116-0.07289494554730.3432947582211.99714647584-10.173618443846.7801111318
44.130690758841.850895642822.0193013975.183205213483.032135032236.700452571590.294899493818-0.576834184493-0.2487200846911.21932026863-0.268401929414-0.1769202617140.677182246551-0.184519371252-0.04831513002370.613640257352-0.06853009515770.006892805808080.334987948956-0.0524508732640.3056447868473.29624655749-11.967812165458.2770135299
58.003963538582.687460651843.046063077612.3230966508-0.04946267552564.11094772232-0.8348007989411.092258029570.134590686755-0.7853375574380.3092976420060.0627534127168-0.07431125237960.3084559909490.1117676877270.897000909035-0.340539897575-0.1264069537610.699460208089-0.01296383845190.13683615986620.89118838589.661802729544.14595744616
66.093185133842.44995769043-2.537894922763.687313023152.907956030366.76614734236-0.31828857891.03778657470.928013970886-0.4549978847530.575785135134-0.399945515883-2.44234596137-0.424124548439-0.06165028708660.986683085134-0.188521532743-0.1701901238820.772566258010.1025530018320.4588977043110.646379215516.88006720186.25067722077
74.25585120011-0.10144284291-1.857214374762.366291907370.8173699016235.19884284706-0.3224426036890.3680839067230.0136424896413-0.1826166209520.2757731681490.03352634346090.3304827460790.01406931687990.1004914522060.431371899418-0.0760442516883-0.0499770164540.261807321453-0.04648112380920.29369161022819.400567179810.597123863123.6707634429
82.265625547510.341608740829-0.5071218768050.859171894048-1.010717386371.12901696456-0.1164863189020.517734853380.0803633492116-0.4326103106780.1934154841470.105428823659-0.0182012682875-0.0594500989024-0.04905311623510.532259071885-0.0831323292722-0.07985861041270.372627104411-0.05116039442440.31860139927617.225860059312.940312848421.0002645127
92.467952335010.823197716155-1.33929596287.95828670914-0.3723962417992.07202147522-0.02366735893-0.242204368115-0.517827374550.25423513333-0.166049963223-0.9344958157430.1748861172080.2616603474960.1779611547880.3591104651650.0163144043649-0.1035918179540.267035101243-0.03875988614960.46928879818618.5147300456-6.329545956846.1433890499
103.57492909976-1.510603578560.2169927155373.88073985343-0.1000066078423.457179612680.01287551943490.2692476140710.078411476535-0.286831739459-0.0245017107032-0.06245081336950.05369312600990.2619048431690.01126126593110.3950829173170.009958405209390.01330834837760.330574202998-0.02878132525920.219334726751.29952018089-45.07973002445.30394990014
113.55442907763-2.559738040041.054054506132.23988682109-0.2472166724251.69330345970.2266894523670.554953861766-0.2340193234-0.356350466557-0.2577012915190.09863415929450.03516367304230.231132483890.02901689325810.360768584183-0.01224471474960.003826407671760.276260627904-0.01792402626380.237210325697-3.93446131081-38.39274976798.07616957252
122.6470068636-1.114843982640.3331213680353.524583115881.0219789446.01651516188-0.227005764457-0.1924069246490.2828227661850.07693878487940.03620278647840.310325881399-0.824658829652-0.5401317769030.09642631309410.4427602902250.0500481295849-0.04691552468860.374723098173-0.07307840259070.286024585517-22.8776399843-14.98746219920.4850865921
135.03691314389-1.4600812418-0.6924149160715.50188780025-5.424763849136.319041361510.118480718547-0.00191984688492-1.10608660243-0.641311945898-0.1301774412410.8311658354710.7707331571570.1971729281610.02080033991350.7038118629060.0813515694225-0.1219895025950.300344893799-0.04541672860550.699056048645.87656492166-61.957673673220.3749793758
144.05560430442-3.412107200353.687732907662.94828343009-3.193100482793.473965609910.144457277501-0.831446857888-0.1081095030210.646344505795-0.0515349556702-2.281201666551.034789980021.63332206337-0.1344515094570.5906964863860.0944091174983-0.01538487107240.6614329721120.008518416794790.78646957812615.4170022557-53.443524232919.272658748
151.58252087211-1.0306052595-0.3867900687723.21397097558-0.1360060846051.17371176106-0.0263430145119-0.167356080486-0.002604549944780.0324380064801-0.04808557649580.1319304483480.1627154173840.1742525852090.05755571369920.392232956871-0.0338984824799-0.08598214507670.289462717688-0.03507748929280.246335063907-1.32805714623-47.642051557530.4075668802
166.224511656643.02435771147-2.054165080984.644218039431.224483157.513854548920.1366967707340.2076800168020.546926371110.9715269934620.049952295897-0.531920701165-0.9043474537470.343923566731-0.05530592950640.391113985962-0.0783114663985-0.04927194537040.325361142679-0.03243275794780.2502983439135.34684252791-42.972712707221.9491996339
171.21982319944-0.0565628000316-0.5877134828681.842890383250.1021507042142.32163824950.0721185870595-0.10368554973-0.108985828015-0.0543912383673-0.129604323874-0.1677925234410.2109624248850.1393249773790.07599548969290.374642065603-0.0343669389501-0.1017845505820.284266746776-0.0183506973860.2856895392122.34835202634-46.551677879328.3791179282
183.55527077653-1.438439292172.848248563533.15423898676-0.9167496968454.649799046410.10355020462-0.446103540749-0.4604327122410.2631910864460.3254826323860.4118142685780.160640823989-0.8910341656-0.3636414445470.36765250627-0.06799375339410.02636648575520.4421460416670.03790914321930.306281915767-22.3832580692-29.012338566328.7544315438
193.86762613650.119783548157-0.1783658442951.191862425050.06754562776521.373376487870.105758000345-0.0230551353113-0.6133183475750.063902812791-0.06246768601180.06637236058520.1731588352470.0836138607521-0.03705044149730.3351284889960.0106328500758-0.05020620536390.229058502756-0.05153130813470.55388599832810.645330393-73.08024117648.8405871761
207.8896805241.68914725582-1.154841621660.380953023483-0.08267400923110.149220184518-0.0196492475568-0.15264313629-0.67488841379-0.001456696717460.0288295164287-0.08334285970670.1116721832730.06693534484170.02042488574240.3359206380680.0236305361816-0.04278202588660.231254328712-0.02758356173470.46589292594216.9159949738-67.141595133450.8296282505
214.34426636049-1.2114909191-0.7302247381044.383398861560.694491161943.115036134020.0794693190679-0.7201207001620.8988387125460.2689535319660.149558946769-0.510053869683-0.1417764073910.296677061331-0.07202115501910.320446217294-0.0262994286351-0.02881285425280.349771385396-0.2569288166420.4802554714837.8623335548-44.026030175458.6701752215
221.154250239220.1566262395510.6309257403681.40959214014-2.328842514454.57107205652-0.2058338223570.314746676092-0.271663790745-0.399833422325-0.4522615745770.442999437707-0.0940706395050.0906784451749-1.479349509240.4615849938410.0121377850497-0.2449146596320.261920245951-0.2055448733770.65114745732-10.8698714102-65.718945970646.8236442285
237.75190217343-2.900083109021.194291322924.08055945429-1.997750705166.84946521774-0.0392298695465-1.09871540014-1.641076329581.06725533855-0.5047053648812.19437105311.50520981622-2.503234833780.220806895980.602903735962-0.2832384202350.0690949591740.6063471343660.04919796243490.887400055795-8.71614214193-72.189197176257.6456187788
242.959809468040.5698984017791.214235469012.821702979640.5091830779641.0246967745-0.0294455214394-0.2383921587820.1374492497680.0796979050863-0.1109096553170.192305836215-0.08647136752560.07723879738570.1539865058520.240704074673-0.000101490343618-0.006104873717130.258766227895-0.05051969216690.187836512931-1.48838756502-51.773927514355.7425472994
250.262705462254-1.12886993385-0.7686523984877.6585157314-0.9303166725847.45143718948-0.229759649316-1.4272729337-0.1803808145180.70068637430.222281535732-0.6851936715310.2683885468870.446214063121-0.02240762271770.3761090332860.0571419350407-0.06324659927160.356404596378-0.1092662256760.3425156387792.79527295203-62.076706069159.5782363886
263.087618275381.024075726050.899797535372.119870957450.5849700331430.218486395073-0.00672025427912-0.299470168524-0.122481904173-0.0919511187063-0.06400887797220.102592784413-0.0518063349275-0.09501352787420.07093267554890.2846245730630.0257276431174-0.01351089997220.284223352353-0.03832551986550.2210326382990.38675729101-54.242561184857.9750930669
276.656862167821.62019413596-0.3540534462484.429215763870.1349438810196.994574493930.2392295997850.1420380022870.971759897337-0.2937858558970.0439809593988-1.15278542338-0.2959140999381.04100925869-0.2867248177620.3329844856270.07029721004910.121883225490.3853983138630.06052290547930.56076002561732.4920047759-38.411480751951.5175124882
285.10396605184-0.487227849091-3.033435009362.207392392880.5752368675215.373197146010.2514473583860.4916787853780.870457136242-0.2085759439-0.0780655614608-0.335778065682-0.311218153872-0.21282558782-0.1641644449680.3354825596460.04744974302180.02268585887790.2666360364480.06419307970490.36805898065522.4552320321-39.120562218152.0250288424
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-IDBeg PDB ins code
11chain 'B' and (resid 1 through 75 )BA1 - 751 - 80
22chain 'B' and (resid 76 through 128 )BA76 - 12881 - 133
33chain 'B' and (resid 129 through 174 )BA129 - 174134 - 179
44chain 'B' and (resid 175 through 214 )BA175 - 214180 - 219
55chain 'P' and (resid 2 through 7 )PB2 - 71 - 6
66chain 'P' and (resid 8 through 13 )PB8 - 137 - 12
77chain 'A' and (resid 3 through 44 )AC3 - 441 - 42
88chain 'A' and (resid 45 through 119 )AC45 - 11943 - 125
99chain 'A' and (resid 120 through 214 )AC120 - 214126 - 213
1010chain 'D' and (resid 1 through 75 )DD1 - 751 - 80
1111chain 'D' and (resid 76 through 113 )DD76 - 11381 - 118
1212chain 'D' and (resid 114 through 213 )DD114 - 213119 - 218
1313chain 'R' and (resid 2 through 7 )RE2 - 71 - 6
1414chain 'R' and (resid 8 through 13 )RE8 - 137 - 12
1515chain 'C' and (resid 3 through 39 )CF3 - 391 - 37
1616chain 'C' and (resid 40 through 52 )CF40 - 5238 - 50
1717chain 'C' and (resid 52A through 119 )CF52 - 11951 - 125A
1818chain 'C' and (resid 120 through 212 )CF120 - 212126 - 209
1919chain 'F' and (resid 1 through 75 )FI1 - 751 - 80
2020chain 'F' and (resid 76 through 113 )FI76 - 11381 - 118
2121chain 'F' and (resid 114 through 211 )FI114 - 211119 - 216
2222chain 'Q' and (resid 2 through 7 )QK2 - 71 - 6
2323chain 'Q' and (resid 8 through 15 )QK8 - 157 - 14
2424chain 'E' and (resid 3 through 39 )EL3 - 391 - 37
2525chain 'E' and (resid 40 through 52 )EL40 - 5238 - 50
2626chain 'E' and (resid 52A through 124 )EL52 - 12451 - 130A
2727chain 'E' and (resid 125 through 145 )EL125 - 145131 - 151
2828chain 'E' and (resid 146 through 213 )EL146 - 213152 - 219

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