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Yorodumi- PDB-6i4g: Crystal Structure of Plasmodium falciparum actin I (H74Q) in the ... -
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Basic information
| Entry | Database: PDB / ID: 6i4g | ||||||||||||
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| Title | Crystal Structure of Plasmodium falciparum actin I (H74Q) in the Mg-K-ATP state | ||||||||||||
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Keywords | CONTRACTILE PROTEIN / hydrolase / filamentous / glideosome / cytoskeleton | ||||||||||||
| Function / homology | Function and homology informationplastid inheritance / schizogony / symbiont-mediated actin polymerization-dependent cell-to-cell migration in host / Caspase-mediated cleavage of cytoskeletal proteins / HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand / striated muscle atrophy / regulation of establishment of T cell polarity / regulation of plasma membrane raft polarization / regulation of receptor clustering / positive regulation of keratinocyte apoptotic process ...plastid inheritance / schizogony / symbiont-mediated actin polymerization-dependent cell-to-cell migration in host / Caspase-mediated cleavage of cytoskeletal proteins / HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand / striated muscle atrophy / regulation of establishment of T cell polarity / regulation of plasma membrane raft polarization / regulation of receptor clustering / positive regulation of keratinocyte apoptotic process / renal protein absorption / positive regulation of protein processing in phagocytic vesicle / phosphatidylinositol 3-kinase catalytic subunit binding / positive regulation of actin nucleation / actin cap / Neutrophil degranulation / regulation of podosome assembly / myosin II binding / host-mediated suppression of symbiont invasion / actin filament severing / entry into host cell by a symbiont-containing vacuole / actin filament depolymerization / actin filament capping / cardiac muscle cell contraction / relaxation of cardiac muscle / podosome / phagocytosis, engulfment / hepatocyte apoptotic process / sarcoplasm / cilium assembly / vesicle-mediated transport / phagocytic vesicle / response to muscle stretch / actin filament polymerization / Neutrophil degranulation / cytoskeleton organization / actin filament / structural constituent of cytoskeleton / cellular response to type II interferon / Hydrolases; Acting on acid anhydrides; Acting on acid anhydrides to facilitate cellular and subcellular movement / protein destabilization / actin filament binding / actin cytoskeleton / lamellipodium / actin cytoskeleton organization / amyloid fibril formation / calcium ion binding / ATP hydrolysis activity / extracellular space / extracellular region / ATP binding / nucleus / plasma membrane / cytoplasm / cytosol Similarity search - Function | ||||||||||||
| Biological species | ![]() ![]() | ||||||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2 Å | ||||||||||||
Authors | Kumpula, E.-P. / Lopez, A.J. / Tajedin, L. / Han, H. / Kursula, I. | ||||||||||||
| Funding support | Finland, Norway, 3items
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Citation | Journal: Plos Biol. / Year: 2019Title: Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation. Authors: Kumpula, E.P. / Lopez, A.J. / Tajedin, L. / Han, H. / Kursula, I. | ||||||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6i4g.cif.gz | 687.3 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb6i4g.ent.gz | 473.6 KB | Display | PDB format |
| PDBx/mmJSON format | 6i4g.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/i4/6i4g ftp://data.pdbj.org/pub/pdb/validation_reports/i4/6i4g | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 6i4dC ![]() 6i4eC ![]() 6i4fC ![]() 6i4hC ![]() 6i4iC ![]() 6i4jC ![]() 6i4kC ![]() 6i4lC ![]() 6i4mC ![]() 4cbuS C: citing same article ( S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| 1 | ![]()
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| 2 | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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About Yorodumi





X-RAY DIFFRACTION
Finland,
Norway, 3items
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