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- PDB-2f19: THREE-DIMENSIONAL STRUCTURE OF TWO CRYSTAL FORMS OF FAB R19.9, FR... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2f19 | |||||||||
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Title | THREE-DIMENSIONAL STRUCTURE OF TWO CRYSTAL FORMS OF FAB R19.9, FROM A MONOCLONAL ANTI-ARSONATE ANTIBODY | |||||||||
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![]() | IMMUNOGLOBULIN | |||||||||
Function / homology | ![]() | |||||||||
Biological species | ![]() ![]() | |||||||||
Method | ![]() | |||||||||
![]() | Lascombe, M.B. / Alzari, P.M. / Poljak, R.J. / Nisonoff, A. | |||||||||
![]() | ![]() Title: Three-dimensional structure of two crystal forms of FabR19.9 from a monoclonal anti-arsonate antibody. Authors: Lascombe, M.-B. / Alzari, P.M. / Poljak, R.J. / Nisonoff, A. #1: ![]() Title: Three-Dimensional Structure of Fab R19.9, A Monoclonal Murine Antibody Specific for the P-Azobenzenearsonate Group Authors: Lascombe, M.B. / Alzari, P.M. / Boulot, G. / Saludjian, P. / Tougard, P. / Berek, C. / Haba, S. / Rosen, E.M. / Nisonoff, A. / Poljak, R.J. #2: ![]() Title: Crystallization of the Fab Fragments of Monoclonal Anti-P-Azophenylarsonate Antibodies and Their Complexes with Haptens Authors: Mariuzza, R.A. / Amit, A.G. / Boulot, G. / Saludjian, P. / Saul, F.A. / Tougard, P. / Poljak, R.J. / Conger, J. / Lamoyi, E. / Nisonoff, A. | |||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 93.8 KB | Display | ![]() |
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PDB format | ![]() | 72.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 374.4 KB | Display | ![]() |
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Full document | ![]() | 394.8 KB | Display | |
Data in XML | ![]() | 11.7 KB | Display | |
Data in CIF | ![]() | 17.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Atom site foot note | 1: RESIDUES PRO L 95, PRO L 141, PRO H 158, AND PRO H 200 ARE CIS PROLINES. |
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Components
#1: Antibody | Mass: 23690.041 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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#2: Antibody | Mass: 23566.316 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.76 Å3/Da / Density % sol: 55.49 % | |||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 7.3 / Method: vapor diffusion, hanging drop / Details: took 8 from original paper: form II | |||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Reflection | *PLUS Highest resolution: 2.5 Å / Num. obs: 16492 / Num. measured all: 4617 / Rmerge(I) obs: 0.08 |
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Processing
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Refinement | Rfactor Rwork: 0.182 / Highest resolution: 2.8 Å Details: THE POSITIONS OF MANY LOOPS IN THE CONSTANT REGION AND OF THE THIRD COMPLEMENTARITY-DETERMINING REGION OF THE HEAVY CHAIN (RESIDUES H 101 - H 109) ARE SOMEWHAT ARBITRARY, AS INDICATED BY ...Details: THE POSITIONS OF MANY LOOPS IN THE CONSTANT REGION AND OF THE THIRD COMPLEMENTARITY-DETERMINING REGION OF THE HEAVY CHAIN (RESIDUES H 101 - H 109) ARE SOMEWHAT ARBITRARY, AS INDICATED BY LARGE TEMPERATURE FACTORS. | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2.8 Å
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Refine LS restraints |
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Refinement | *PLUS Lowest resolution: 6 Å / Num. reflection obs: 10340 / σ(F): 3 | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS |