+Open data
-Basic information
Entry | Database: PDB / ID: 1ghf | ||||||
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Title | ANTI-ANTI-IDIOTYPE GH1002 FAB FRAGMENT | ||||||
Components | (ANTI-ANTI-IDIOTYPE GH1002 FAB FRAGMENT) x 2 | ||||||
Keywords | ANTIBODY FAB FRAGMENT | ||||||
Function / homology | Immunoglobulins / Immunoglobulin-like / Sandwich / Mainly Beta Function and homology information | ||||||
Biological species | Mus musculus (house mouse) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 2.7 Å | ||||||
Authors | Ban, N. / Day, J. / Wang, X. / Ferrone, S. / McPherson, A. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1996 Title: Crystal structure of an anti-anti-idiotype shows it to be self-complementary. Authors: Ban, N. / Day, J. / Wang, X. / Ferrone, S. / McPherson, A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1ghf.cif.gz | 89.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1ghf.ent.gz | 68.9 KB | Display | PDB format |
PDBx/mmJSON format | 1ghf.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1ghf_validation.pdf.gz | 375.1 KB | Display | wwPDB validaton report |
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Full document | 1ghf_full_validation.pdf.gz | 395.4 KB | Display | |
Data in XML | 1ghf_validation.xml.gz | 12 KB | Display | |
Data in CIF | 1ghf_validation.cif.gz | 17.6 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/gh/1ghf ftp://data.pdbj.org/pub/pdb/validation_reports/gh/1ghf | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Antibody | Mass: 23427.670 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Mus musculus (house mouse) |
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#2: Antibody | Mass: 23111.094 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Mus musculus (house mouse) |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.61 Å3/Da / Density % sol: 52.9 % | ||||||||||||||||||||
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Crystal grow | *PLUS Method: vapor diffusion | ||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction source | Wavelength: 1.5418 |
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Detector | Type: XUONG-HAMLIN MULTIWIRE / Detector: AREA DETECTOR |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Num. obs: 13743 / % possible obs: 97 % / Observed criterion σ(I): 1 / Redundancy: 4.5 % / Rmerge(I) obs: 0.076 |
Reflection | *PLUS Highest resolution: 2.7 Å / Num. measured all: 65132 |
Reflection shell | *PLUS Highest resolution: 2.7 Å / Lowest resolution: 2.8 Å / % possible obs: 92 % |
-Processing
Software |
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Refinement | Resolution: 2.7→30 Å / σ(F): 3 /
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Displacement parameters | Biso mean: 10.4 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.7→30 Å
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Refine LS restraints |
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Software | *PLUS Name: X-PLOR / Version: 3.1 / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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