[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 166 items for (author: zhang & ym)

EMDB-46785:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), consensus map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46786:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), left wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46787:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), right wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46789:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), tail focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-46791:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 1, U-deletion (RECC1), composite map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-63715:
Cryo-EM structure of the human TRPA1 ion channel in complex with crotalphine.
Method: single particle / : Kang MM, Zhang YM, Ding XF, Wang LJ, Sun WY, Jiang H, Chen D, Xu JF, Pang XY

EMDB-63720:
Cryo-EM structure of the human TRPA1 ion channel in ligand-free state.
Method: single particle / : Kang MM, Zhang YM, Ding XF, Wang LJ, Sun WY, Jiang H, Chen D, Xu JF, Pang XY

EMDB-65526:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

PDB-9w1c:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

EMDB-62019:
The structure of Microviridae PJNS001
Method: single particle / : Hu WL, Chen YB, Wei YM, Gao Y

EMDB-62020:
The Map of PJNS002 spike protein G with Salmonella enterica LPS
Method: single particle / : Hu WL, Chen YB, Wei YM, Gao Y

EMDB-62021:
The STA map of PJNS001 attached on Salmonella outer membrane
Method: subtomogram averaging / : Hu WL, Chen YB, Wei YM, Gao Y

EMDB-62022:
The STA map of PJNS002 attached on Salmonella outer membrane
Method: subtomogram averaging / : Hu WL, Chen YB, Wei YM, Gao Y

EMDB-62023:
The structure of Salmonella phage PJNS002
Method: single particle / : Hu WL, Chen YB, Wei YM, Gao Y

EMDB-61379:
membrane proteins
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61380:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61385:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61386:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61392:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61393:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-61395:
taurine transporter
Method: single particle / : Yu J, Ge JP, Zh YM

EMDB-19341:
TRIF Oligomerisation
Method: helical / : Moncrieffe MC, Verstak B, Whitely L, Symmoms MF, Soares SG, Egelman EH, Klenerman D, Bryant CE, Gay NJ

EMDB-62579:
Cryo-EM structure of C-Methyltransferase from Rhododendron dauricum
Method: single particle / : Ye YM, Dai ZD, Zhang MZ

EMDB-50034:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-50035:
SARS-CoV-2 M protein dimer (long form) in complex with Fab-E and incubated with CIM-834
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-9exa:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-39770:
LH2 complex from Ectothiorhodospira haloalkaliphila at near-atomic resolution
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

PDB-8z4v:
LH2 complex from Ectothiorhodospira haloalkaliphila at near-atomic resolution
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

EMDB-39101:
Cryo-EM structure and rational engineering of a novel efficient ochratoxin A-detoxifying amidohydrolase
Method: single particle / : Dai LH, Xu YH, Hu YM, Niu D, Yang XC, Shen PP, Li X, Xie ZZ, Li H, Guo RT, Chen CC

EMDB-39098:
Cryo-electron microscopic structure of an amide hydrolase from Pseudoxanthomonas wuyuanensis
Method: single particle / : Dai LH, Xu YH, Hu YM, Niu D, Yang XC, Shen PP, Li X, Xie ZZ, Li H, Guo RT, Chen CC

EMDB-18946:
Cryo-EM structure of the FIGNL1 AAA hexamer bound to RAD51
Method: single particle / : Carver A, Yates LA, Zhang X

PDB-8r64:
Cryo-EM structure of the FIGNL1 AAA hexamer bound to RAD51
Method: single particle / : Carver A, Yates LA, Zhang X

EMDB-18549:
Ammonium Transporter Amt1 from Shewanella denitrificans
Method: single particle / : Gschell M, Zhang L, Einsle O, Andrade S

PDB-8qpf:
Ammonium Transporter Amt1 from Shewanella denitrificans
Method: single particle / : Gschell M, Zhang L, Einsle O, Andrade S

EMDB-18334:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18335:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18336:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18337:
Cryo-EM structure of the outward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-18339:
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-19009:
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcs:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qct:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcx:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcy:
Cryo-EM structure of the outward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qd0:
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8r8t:
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

EMDB-36202:
Cryo-EM structure of alpha-synuclein gS87 fibril
Method: helical / : Xia WC, Sun YP, Liu C, Tao YQ

EMDB-36203:
Cryo-EM structure of alpha-synuclein pS87 fibril
Method: helical / : Xia WC, Sun YP, Liu C, Tao YQ

EMDB-35809:
Cellular components in INS-1E cell periphery
Method: electron tomography / : Li W, Li A, Yu B, Zhang X, Liu X, White K, Stevens R, Baumeister W, Sali A, Jasnin M, Sun L

EMDB-35839:
Cellular components at INS-1E cell periphery under second phase of glucose-stimulated insulin secretion
Method: electron tomography / : Li W, Li A, Yu B, Zhang X, Liu X, White K, Stevens R, Baumeister W, Sali A, Jasnin M, Sun L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more