[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 106 items for (author: zhang & xz)

EMDB-65963:
In situ subtomogram average of 80S ribosome (local refined with LSU mask)
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68807:
Cryo-EM structure of human apoferritin at 1.81 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68808:
Cryo-EM structure of human apoferritin at 1.79 Angstrom resolution(using BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68809:
Cryo-EM structure of human apoferritin at 1.64 Angstrom resolution(using CR-BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68810:
Cryo-EM structure of human apoferritin at 1.65 Angstrom resolution(using BIS data collection on Falcon4i).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68811:
Cryo-EM structure of human apoferritin at 2.05 Angstrom resolution(using CR-BIS data collection on K3).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68812:
Cryo-EM structure of human apoferritin at 2.05 Angstrom resolution(using BIS data collection on K3).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

EMDB-68813:
Subtomogram average structure of human apoferritin at 2.21 Angstrom resolution(using CR-BIS data collection on K3).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68814:
Subtomogram average structure of human apoferritin at 2.28 Angstrom resolution(using BIS data collection on K3).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68815:
Subtomogram average structure of human apoferritin at 1.98 Angstrom resolution(using CR-BIS data collection on Falcon4i).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68816:
Subtomogram average structure of human apoferritin at 2.01 Angstrom resolution(using BIS data collection on Falcon4i).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68817:
Subtomogram average structure of human apoferritin at 2.24 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68818:
Subtomogram average structure of human apoferritin at 2.34 Angstrom resolution(using BIS data collection on Falcon4).
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-63561:
Structure of neuropeptide FF receptor 1 complex with NPVF
Method: single particle / : Pan BX, Jiang Y, Li XZ

EMDB-63578:
Cryo-EM structures of NPFFR2 complex with neuropeptide FF
Method: single particle / : Pan BX, Li XZ, Jiang Y

EMDB-63584:
Structure of neuropeptide FF receptor 1 complex with NPFF
Method: single particle / : Pan BX, Jiang Y, Li XZ

EMDB-63637:
Cryo-EM structure of neuropeptide FF receptor 2 complex with NPVF
Method: single particle / : Pan BX, Jiang Y, Li XZ

EMDB-38654:
State 8a (S8a) of yeast 80S ribosome bound to 3 tRNAs and eEF1A and eEF3 during mRNA decoding
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38655:
State 8 (S8) of yeast 80S ribosome bound to 3 tRNAs and eEF1A during mRNA decoding
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38656:
State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs and eEF1A during mRNA decoding
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38657:
State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38658:
State 2a (S2a) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38659:
State 2b (S2b) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38660:
State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38661:
State 2d (S2d) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transfer
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38662:
State 2e (S2e) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38663:
State 2f (S2f) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38664:
State 3 (S3) of yeast 80S ribosome bound to 2 tRNAs during translocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38665:
State 4 (S4) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38666:
State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38667:
State 5 (S5) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38668:
State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38669:
State 7 (S7) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during tranlocation
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38670:
State 9 (S9) of yeast 80S ribosome bound to 2 tRNAs
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38671:
State 10 (S10) of yeast 80S ribosome bound to A tRNA
Method: single particle / : Cheng J, Wu CL, Li JX, Zhang XZ

EMDB-38080:
SIRM reconstruction of the MC-45 de novo processed ribosome 50S
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38081:
Conventional Reconstruction of the MC-45 de novo processed ribosome 50S
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38082:
SIRM reconstruction of the unpublished protein
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38083:
The SIRM reconstruction of the MC-40 de novo processed HA-trimer
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38084:
The conventional reconstruction of the MC-40 de novo processed HA-trimer
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38085:
The SIRM reconstruction of the MC-45 de novo processed PS1
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-38086:
The conventional reconstruction of the MC-45 de novo processed PS1
Method: single particle / : Zhang XZ, Zhu DJ, Cao WL

EMDB-39299:
Human resource SGLT1-MAP17 complex
Method: single particle / : Chen L, Zhang XZ

EMDB-36980:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-36982:
Cryo-EM structure of DSR2-DSAD1 state 2
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37272:
Cryo-EM structure of DSR2-DSAD1 state 1
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37603:
Cryo-EM structure of DSR2-DSAD1
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-38421:
Cryo-EM structure of tail tube protein
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37497:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-36123:
Cryo-EM structure of the NmeCas9-sgRNA-AcrIIC4 ternary complex
Method: single particle / : Yin H, Li Z, Yu GM, Li XZ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more