[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,062 items for (author: zhang & ch)

EMDB-65233:
Composite map of Type II-A CRISPR integrase prespacer catching complex, State II
Method: single particle / : Li ZX, Xiao YB

EMDB-75407:
Dimeric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

EMDB-75408:
Heparin-induced cis tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

EMDB-75409:
Heparin-induced trans tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

PDB-10ri:
Dimeric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

PDB-10rj:
Heparin-induced cis tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

PDB-10rk:
Heparin-induced trans tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
Method: single particle / : Chen L, Bai X, Zhang X

EMDB-70938:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (sub-conformation 1 of tRNA anticodon arm tilted)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70939:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with non-complementary 5' leader (sub-conformation 2 of tRNA anticodon arm tilted)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70942:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in 5 mM Mg2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70943:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70944:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with precursor tRNA in 1 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70945:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with mature tRNA in 5 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70946:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with non-complementary 5' leader
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70947:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with loop-back 5' leader (sub-conformation 1 of tRNA anticodon arm tilted)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-70948:
Structure of Geobacillus stearothermophilus RNase P holoenzyme in complex with the precursor tRNA with loop-back 5' leader (sub-conformation 2 of tRNA anticodon arm tilted)
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-66342:
Cryo-EM structure of reduced form of formatedehydrogenase from Rhodobacter aestuarii (RaFDH) with NADH
Method: single particle / : Zhang K, Zhang L

PDB-9wxb:
Cryo-EM structure of reduced form of formatedehydrogenase from Rhodobacter aestuarii (RaFDH) with NADH
Method: single particle / : Zhang K, Zhang L

EMDB-69219:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-69220:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sp:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sq:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-71664:
Cryo-EM structure of human NCC with chlorthalidone (C2)
Method: single particle / : Zhang J, Feng L

EMDB-71665:
Cryo-EM structure of human NCC with chlorthalidone
Method: single particle / : Zhang J, Feng L

EMDB-71666:
Cryo-EM structure of human NCC with indapamide
Method: single particle / : Zhang J, Feng L

PDB-9pie:
Cryo-EM structure of human NCC with chlorthalidone (C2)
Method: single particle / : Zhang J, Feng L

PDB-9pif:
Cryo-EM structure of human NCC with chlorthalidone
Method: single particle / : Zhang J, Feng L

PDB-9pig:
Cryo-EM structure of human NCC with indapamide
Method: single particle / : Zhang J, Feng L

EMDB-71685:
Cryo-EM structure of human NXPE1
Method: single particle / : Zhang H, Li F, Piper D, Min X

EMDB-68620:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

PDB-22rj:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

EMDB-66589:
Cryo-EM structure of the human KCNQ2/3 heteromer channel
Method: single particle / : Cheng XY, Wan SY, Hou PP, Zhang J

PDB-9x5j:
Cryo-EM structure of the human KCNQ2/3 heteromer channel
Method: single particle / : Cheng XY, Wan SY, Hou PP, Zhang J

EMDB-66501:
glycoprotein of mengla virus with MR191 Fab bound
Method: single particle / : Wang L, Zou B, Liu B, Xue L, He J, Xiong X, Xiaoli X

EMDB-66502:
apo state of Mengla Virus Glycoprotein
Method: single particle / : Wang L, Zou B, Liu B, Xue L, He J, Xiong X, Xiaoli X

EMDB-68626:
Human KCNQ3-XEN1101 complex in the presence of PIP2
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

PDB-22rq:
Human KCNQ3-XEN1101 complex in the presence of PIP2
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

EMDB-70934:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 10 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-54374:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

PDB-9ryb:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-65364:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65365:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65366:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65367:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65368:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vui:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more