[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,979 items for (author: yin & m)

EMDB-59866:
Phosphorylated STING bound to adaptor protein complex 1 (processed for improved pSTING density)
Method: single particle / : Xu P, Ablasser A

EMDB-79039:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

PDB-38pm:
Australian bat lyssavirus glycoprotein PH domain in complex with broadly neutralizing human antibodies A6 and RVC20
Method: single particle / : Xu K, Xu Y

EMDB-65307:
Structure of Cdr1 with Tacrolimus
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65308:
Structure of Cdr1 with curcumin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65309:
Structure of Cdr1 with beauvericin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65311:
Structure of Cdr1 with Fluconazole at the near site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65312:
Structure of Cdr1 with ATP/ADP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65313:
Structure of Cdr1 with Fluconazole at the middle site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65335:
Structure of Cdr1 with AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65336:
Structure of Cdr1 with AMPPNP and the far site Fluconazole
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-65337:
Structure of Cdr1 with AMPPNP/AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-68246:
Structure of apo Cdr1
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-22fr:
Structure of apo Cdr1
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsu:
Structure of Cdr1 with Tacrolimus
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsv:
Structure of Cdr1 with curcumin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsw:
Structure of Cdr1 with beauvericin
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vsz:
Structure of Cdr1 with Fluconazole at the near site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vt1:
Structure of Cdr1 with ATP/ADP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vt2:
Structure of Cdr1 with Fluconazole at the middle site
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vtm:
Structure of Cdr1 with AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vtn:
Structure of Cdr1 with AMPPNP and the far site Fluconazole
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

PDB-9vto:
Structure of Cdr1 with AMPPNP/AMPPNP
Method: single particle / : Wang Z, Yang S, Zhang B, Yu X

EMDB-68820:
CryoEM structure of EV-D68 US/MO/14-18947 mature virion
Method: single particle / : Liang SJ, Lou ZY

EMDB-68830:
CryoEM structure of EV-D68 US/MO/14-18947 in complex with MFSD6-L3
Method: single particle / : Liang SJ, Lou ZY

EMDB-68851:
CryoEM structure of EV-D68 US/KY/14-18953 mature virion
Method: single particle / : Liang SJ, Lou ZY

EMDB-69155:
CryoEM structure of EV-D68 US/KY/14-18953 in complex with MFSD6-L3
Method: single particle / : Liang SJ, Lou ZY

PDB-23ay:
CryoEM structure of EV-D68 US/MO/14-18947 mature virion
Method: single particle / : Liang SJ, Lou ZY

PDB-23bg:
CryoEM structure of EV-D68 US/MO/14-18947 in complex with MFSD6-L3
Method: single particle / : Liang SJ, Lou ZY

PDB-23bx:
CryoEM structure of EV-D68 US/KY/14-18953 mature virion
Method: single particle / : Liang SJ, Lou ZY

PDB-23ps:
CryoEM structure of EV-D68 US/KY/14-18953 in complex with MFSD6-L3
Method: single particle / : Liang SJ, Lou ZY

EMDB-55261:
cryo-EM structure of LwHicAB-crRNA
Method: single particle / : Liang L, Jiyun C, Xueyan L

PDB-9svk:
cryo-EM structure of LwHicAB-crRNA
Method: single particle / : Liang L, Jiyun C, Xueyan L

EMDB-66732:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

EMDB-66735:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q, Wu Y

EMDB-66822:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

PDB-9xch:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9xcm:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q

PDB-9xfh:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S

EMDB-66478:
complex of anti-CRISPR Protein
Method: single particle / : Wang WH, Xie YC

EMDB-68883:
anti-Crispr protein in apo form
Method: single particle / : Wang WH, Xie YC

PDB-23dj:
anti-Crispr protein in apo form
Method: single particle / : Wang WH, Xie YC

PDB-9x2f:
complex of anti-CRISPR Protein
Method: single particle / : Wang WH, Xie YC

EMDB-74421:
8 nm Cartwheel Subunit from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74424:
8 nm Cartwheel Central Hub from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74426:
16nm Cartwheel Central Hub from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-74427:
16 nm Cartwheel Subunit from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-76289:
16nm Microtubule Triplet from Trichonympha spp.
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

PDB-9zmk:
Cartwheel Assembly of T. agilis SAS-6
Method: subtomogram averaging / : Rowsell CM, Arin A, Bui KH

EMDB-75687:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more