[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 9,185 items for (author: xu & he)

EMDB-76463:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76464:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76465:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iy:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iz:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12ja:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-65291:
CryoEM map of PARP10 oligomer
Method: single particle / : Xu Q, Chen XX, Shi ZB

EMDB-65272:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

EMDB-65274:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqp:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqr:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

EMDB-65314:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

EMDB-65343:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-9vt4:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

PDB-9vts:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-36cg:
Apo form of human bile salts export pump ABCB11
Method: single particle / : Wang L, How WT

EMDB-65484:
Tspan-7 Tetramer Structure in Retraction Fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65485:
Tspan-7 dimer structure in retraction fiber
Method: single particle / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65519:
in situ Tspan-7 spiral structure in cellular retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65524:
in situ Tspan7-GFP spiral in retraction fiber
Method: subtomogram averaging / : Jia X, Wang DJ, Li XP, Liu N, Yu L, Wang HW

EMDB-65271:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

EMDB-65275:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

EMDB-65276:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

EMDB-65277:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

EMDB-65278:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqo:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

PDB-9vqs:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

PDB-9vqt:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqu:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqv:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

EMDB-66053:
Cryo-EM structure of human papillomavirus type 45 in complexed with the Fab fragment of A14D2
Method: single particle / : Jiang Y, Sun H, Wang Z, Zheng Q, Li S, Xia N

EMDB-66054:
Cryo-EM structure of human papillomavirus type 45 in complexed with the Fab fragment of A20C10
Method: single particle / : Jiang Y, Sun H, Wang Z, Zheng Q, Li S, Xia N

EMDB-65617:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

PDB-9w43:
Structure of the complex of human PD-1 and a PD-1-directed antibody
Method: single particle / : Jiang WB, Xu JL

EMDB-58529:
CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-N-terminal monoclonal antibody
Method: single particle / : Lau RJ, Wu GHY, Barritt JD, Huemer CB, Matthews S

EMDB-58555:
CryoEM structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes complexed with an anti-PA-domain monoclonal antibody
Method: single particle / : Lau RJ, Barritt JD, Wu GHY, Huemer CB, Matthews S

EMDB-69126:
Cryo-EM structure of the cebranopadol-NOP receptor-Gi complex
Method: single particle / : Lai Y, Huang X, Shen S, Hu W, Xu HE, Wang Y

PDB-23oi:
Cryo-EM structure of the cebranopadol-NOP receptor-Gi complex
Method: single particle / : Lai Y, Huang X, Shen S, Hu W, Xu HE, Wang Y

EMDB-69218:
Cryo-EM structure of the cebranopadol-mu opioid receptor-Gi complex
Method: single particle / : Lai Y, Huang X, Shen S, Hu W, Xu HE, Wang Y

PDB-23so:
Cryo-EM structure of the cebranopadol-mu opioid receptor-Gi complex
Method: single particle / : Lai Y, Huang X, Shen S, Hu W, Xu HE, Wang Y

EMDB-64397:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64398:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64399:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upm:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upn:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upo:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-41497:
Structure of the H-lobe of human MED12
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-41500:
Structure of the kinase and central lobes of human CDK8 kinase module
Method: single particle / : Chen SF, Chao TC, Kim HJ, Tang HC, Khadka S, Li T, Murakami K, Boyer TG, Tsai KL

EMDB-67439:
Cryo-EM structure of Gq-coupled LPAR5 in complex with LPA
Method: single particle / : Zhao L, Li X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more