[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 983 items for (author: xiong & p)

EMDB-76879:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA)
Method: subtomogram averaging / : Park D

EMDB-76880:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA-complemented)
Method: subtomogram averaging / : Park D

EMDB-76881:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin treated)
Method: subtomogram averaging / : Park D

EMDB-76882:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76883:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin + pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76884:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (wt)
Method: subtomogram averaging / : Park D

EMDB-74415:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74418:
Human cytomegalovirus UL52 3-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74419:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zly:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zm2:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-65146:
Cryo-EM structure of SULTR-like phosphate distribution transporter
Method: single particle / : Liu Y, Zhang J, He H, Liu Z

EMDB-65155:
Cryo-EM structure of SULTR-like phosphate distribution transporter with phosphate
Method: single particle / : Liu Y, Zhang J, He H, Liu Z

PDB-9vky:
Cryo-EM structure of SULTR-like phosphate distribution transporter
Method: single particle / : Liu Y, Zhang J, He H, Liu Z

PDB-9vl5:
Cryo-EM structure of SULTR-like phosphate distribution transporter with phosphate
Method: single particle / : Liu Y, Zhang J, He H, Liu Z

EMDB-66754:
Crimean-Congo hemorrhagic fever virus RNA polymerase
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66755:
Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with the 5' vRNA
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66756:
Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with the 3' vRNA
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66783:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated 2FC
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66784:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated cytidine
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66785:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 15-bp RNA product
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-66787:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 9-bp RNA product
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xd4:
Crimean-Congo hemorrhagic fever virus RNA polymerase
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xd5:
Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with the 5' vRNA
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xd6:
Crimean-Congo hemorrhagic fever virus RNA polymerase in complex with the 3' vRNA
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xe6:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated 2FC
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xe7:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 10-bp RNA product and incorporated cytidine
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xe9:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 15-bp RNA product
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

PDB-9xec:
Crimean-Congo hemorrhagic fever virus RNA polymerase containing a 9-bp RNA product
Method: single particle / : Xue L, Gui J, Pan H, Chang T, Xiong X

EMDB-65442:
Cryo-EM Structure of Nipah Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65444:
Cryo-EM Structure of Measles Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65445:
Cryo-EM Structure of Nipah Virus Polymerase in complex with GL22
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65446:
Cryo-EM structure of Measles Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65447:
Cryo-EM Structure of Peste Des Petits Ruminants Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-65448:
Cryo-EM structure of Peste Des Petits Ruminants Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-68072:
Cryo-EM Structure of Nipah Virus Polymerase in complex with G671
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-21xo:
Cryo-EM Structure of Nipah Virus Polymerase in complex with G671
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxv:
Cryo-EM Structure of Nipah Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxx:
Cryo-EM Structure of Measles Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxy:
Cryo-EM Structure of Nipah Virus Polymerase in complex with GL22
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vxz:
Cryo-EM structure of Measles Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vy0:
Cryo-EM Structure of Peste Des Petits Ruminants Virus Polymerase in complex with ERDRP-0519
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

PDB-9vy1:
Cryo-EM structure of Peste Des Petits Ruminants Virus L Protein bound by Phosphoprotein Tetramer
Method: single particle / : Xue L, Gui J, Chang T, Pan H, Xiong X

EMDB-71417:
Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles
Method: single particle / : Wu C, Meuser ME, Xiong Y

EMDB-71418:
CA-SP1 immature lattice assembled in vitro with inhibitor lenacapavir (dialyzed to 50nM)
Method: single particle / : Wu C, Meuser ME, Xiong Y

PDB-9p9l:
Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles
Method: single particle / : Wu C, Meuser ME, Xiong Y

PDB-9p9m:
CA-SP1 immature lattice assembled in vitro with inhibitor lenacapavir (dialyzed to 50nM)
Method: single particle / : Wu C, Meuser ME, Xiong Y

EMDB-64402:
Cryo-EM strucutre of CXCR4 complexed with agonist SDV1a
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

EMDB-64403:
Cryo-EM structure of CXCR4 complexed with agonist SDVX1
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

PDB-9upu:
Cryo-EM strucutre of CXCR4 complexed with agonist SDV1a
Method: single particle / : Jiao HZ, Sang XH, Huang ZW, Hu HL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more