[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,041 items for (author: xia & yn)

EMDB-71076:
Human liver phosphofructokinase-1 bound to XJ-4-85
Method: single particle / : Lynch EM, Jiang X, Hsu KL, Kollman JM

PDB-9p0j:
Human liver phosphofructokinase-1 bound to XJ-4-85
Method: single particle / : Lynch EM, Jiang X, Hsu KL, Kollman JM

EMDB-75912:
Focused subtomogram average of the transition zone doublet microtubule (c) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75913:
Focused subtomogram average of the transition zone doublet microtubule (b) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75914:
Focused subtomogram average of the transition zone linker (linker1) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75915:
Focused subtomogram average of the transition zone linker (linker4) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75916:
Focused subtomogram average of the transition zone doublet microtubule (e) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75917:
Focused subtomogram average of the transition zone doublet microtubule (a) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75918:
Focused subtomogram average of the transition zone linker (linker3) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75919:
In situ subtomogram average of the transition zone doublet microtubule in human airway cilia (consensus map)
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75920:
Focused subtomogram average of the transition zone doublet microtubule (d) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-75921:
Focused subtomogram average of the transition zone linker (linker2) in human airway cilia
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-76171:
In situ subtomogram average of the transition zone linker in human airway cilia (consensus map)
Method: subtomogram averaging / : ZHOU H, Brown A

EMDB-76173:
In situ subtomogram average of the transition zone linker in human airway cilia (composite map)
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-76188:
In situ subtomogram average of the transition zone doublet microtubule in human airway cilia (composite map)
Method: subtomogram averaging / : Zhou H, Brown A

PDB-11xu:
In situ subtomogram average of the transition zone linker in human airway cilia (composite map)
Method: subtomogram averaging / : Zhou H, Brown A

PDB-11yj:
In situ subtomogram average of the transition zone doublet microtubule in human airway cilia (composite map)
Method: subtomogram averaging / : Zhou H, Brown A

EMDB-80068:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter 5 in apo state
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80158:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter 5 subjected to ATP dialysis
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80160:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter 5 purified in the presence of NaCl and ATP
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80170:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter 5 incubated with AMPPNP
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80182:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter 5 mutant - H527A
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80193:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter mutant - K759A
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80202:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter mutant - H527R, K759H
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80203:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter mutant - H527R, E565N, K759H
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-80204:
Cryo-EM structure of the Arabidopsis thaliana potassium transporter mutant - H527R, E565N, K759H, K778E, E734K
Method: single particle / : Wang C, Wang XH, Qu YN, Shen HZ

EMDB-71893:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-73816:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9pvm:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9z5i:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-82115:
In Situ Subtomogram Average of the 80S Ribosome in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82118:
In Situ Subtomogram Average of the 60S Ribosomal Subunit in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82119:
In Situ Subtomogram Average of the Free 60S Ribosomal Subunit in the Soma of Rat Hippocampal Neuron
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82120:
In Situ Subtomogram Average of the 80S Ribosome in the Soma of Rat Hippocampal Neurons
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-75346:
Membrane protein solubilization and structure determination using de novo-designed amphipathic proteins
Method: single particle / : Borst AJ, Weidle C

EMDB-75350:
WRAP-TP0698
Method: single particle / : Borst AJ

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-70743:
Nucleosome subtomogram average from chromatin droplets reconstituted with 30 bp linker DNA
Method: subtomogram averaging / : Zhou H, Rosen M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more