[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,386 items for (author: williams & l)

EMDB-72740:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-33 at arm 4 at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72741:
Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV in complex with Fab fragment of the antibody EEEV-179
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72743:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-179 at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72745:
Localized reconstruction of the asymmetric unit of SINV/EEEV at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72746:
Localized reconstruction of the asymmetric unit of SINV/EEEV at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72747:
Localized reconstruction of the asymmetric unit of SINV/EEEV.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72748:
Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-73016:
Icosahedral reconstruction of EEEV at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-73024:
EEEV + EEEV-179 Fab at pH 5.6
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yaw:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-33 at arm 4 at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yax:
Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV in complex with Fab fragment of the antibody EEEV-179
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yaz:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-179 at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yb1:
Localized reconstruction of the asymmetric unit of SINV/EEEV at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yb2:
Localized reconstruction of the asymmetric unit of SINV/EEEV at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yb3:
Localized reconstruction of the asymmetric unit of SINV/EEEV.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9yb4:
Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-70628:
Cryo-EM structure of the salivary protein complex Saglin-SGS4 from Anopheles gambiae
Method: single particle / : Su T, Liu S, Williams AE, Calvo E, Zhou ZH

PDB-9on3:
Cryo-EM structure of the salivary protein complex Saglin-SGS4 from Anopheles gambiae
Method: single particle / : Su T, Liu S, Williams AE, Calvo E, Zhou ZH

EMDB-53321:
Focused refinement of the MGRN1 ubiquitin ligase in complex with MEGF8, MOSMO and nanobody 270
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53322:
Structure of the MMM ubiquitin ligase complex with nanobody 270 (Consensus map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53313:
Structure of the MEGF8-MOSMO complex with nanobody 270 (Focused refinement)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53323:
Cryo-EM structure of the MMM ubiquitin ligase complex with nanobody 270 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53327:
Structure of the helix-stabilized MMM ubiquitin ligase complex with nanobody 270 (Consensus map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53328:
Focused refinement of the MGRN1 ubiquitin ligase in complex with helix-stabilized MEGF8, MOSMO and nanobody 270
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53329:
Cryo-EM structure of the helix-stabilized MMM ubiquitin ligase complex with nanobody 270 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Steyaert J, Bazan F, Rouse S, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53336:
Focused refinement of the MEGF8-MOSMO complex with nanobody 992
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53337:
Focused refinement of the MEGF8 and MOSMO extracellular domains with nanobody 992
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53338:
Focused refinement of the MGRN1 ubiquitin ligase in complex with MEGF8, MOSMO and nanobody 992
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53339:
Structure of the MMM ubiquitin ligase complex with nanobody 992 (Consensus map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53340:
Cryo-EM structure of the MMM ubiquitin ligase complex with nanobody 992 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Sarkar P, Latorraca NR, Lartey D, Gao L, Milenkovic L, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-53367:
Cryo-EM structure of the binary MEGF8-MOSMO complex with nanobody 270
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-57249:
Focused refinement of the helix-stabilized MEGF8-MOSMO complex with nanobody 270
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

PDB-9qqs:
Structure of the MEGF8-MOSMO complex with nanobody 270 (Focused refinement)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

PDB-9qru:
Cryo-EM structure of the MMM ubiquitin ligase complex with nanobody 270 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

PDB-9qs6:
Cryo-EM structure of the helix-stabilized MMM ubiquitin ligase complex with nanobody 270 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Steyaert J, Bazan F, Rouse S, Marqusee S, Kong JH, Rohatgi R, Siebold C

PDB-9qsh:
Cryo-EM structure of the MMM ubiquitin ligase complex with nanobody 992 (Composite map)
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

PDB-9qty:
Cryo-EM structure of the binary MEGF8-MOSMO complex with nanobody 270
Method: single particle / : Williams C, Carrique L, Pardon E, Nocka LM, Hedger G, Pusapati GV, Parashara P, Latorraca NR, Sarkar P, Lartey D, Gao L, Milenkovic L, Chalk R, Steyaert J, Bazan F, Rouse SL, Marqusee S, Kong JH, Rohatgi R, Siebold C

EMDB-70081:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70101:
Phosphomimetic (T209E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70112:
Phosphonull (S56A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o3o:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o4h:
Phosphomimetic (T209E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o4r:
Phosphonull (S56A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70144:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o5l:
Phosphonull (T175E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70087:
Phosphonull (T209A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o3z:
Phosphonull (T209A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9qw5:
Urate Oxidase from Aspergillus Flavus with its Inhibitor 9-Methyl Uric Acid by continuous serial electron diffraction (SerialED)
Method: electron crystallography / : Hofer G, Wang L, Pacoste L, Hager P, Fonjallaz A, Scaletti Hutchinson E, Stenmark P, Di Palma M, Williams L, Worral J, Steiner R, Xu H, Zou X

PDB-9qw6:
Urate Oxidase from Aspergillus Flavus with its Substrate Uric Acid by continuous serial electron diffraction (SerialED)
Method: electron crystallography / : Hofer G, Wang L, Pacoste L, Hager P, Fonjallaz A, Scaletti Hutchinson E, Stenmark P, Di Palma M, Williams L, Worral J, Steiner R, Xu H, Zou X

EMDB-49941:
Cryo-EM structure of NVL bound the the MM927 inhibitor
Method: single particle / : Cruz VE, Erzberger JP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more