[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 627 items for (author: williams & de)

EMDB-52409:
Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor ORG25543
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

EMDB-52410:
Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor RPI-GLYT2-82
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides SA, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

EMDB-52411:
Inward-open structure of human glycine transporter 2 in substrate-free state
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

EMDB-53509:
Inward-occluded structure of human glycine transporter 2 bound to substrate glycine
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

PDB-9hue:
Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor ORG25543
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

PDB-9huf:
Outward-open structure of human glycine transporter 2 bound to allosteric inhibitor RPI-GLYT2-82
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

PDB-9hug:
Inward-open structure of human glycine transporter 2 in substrate-free state
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

PDB-9r1h:
Inward-occluded structure of human glycine transporter 2 bound to substrate glycine
Method: single particle / : Cantwell Chater RP, Peiser-Oliver J, Pati TK, Quinn AS, Lotsaris I, Frangos ZJ, Anderson KE, Tischer AE, Williams-Noonan BJ, Aubrey KR, O Mara ML, Michaelides M, Mohammadi SA, Cioffi CL, Vandenberg RJ, Shahsavar A

EMDB-55519:
cryo-EM structure of CPSF160-WDR33-ZC3H18
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

EMDB-55520:
cryo-EM map of the human mPSF with FIP1
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

PDB-9t3x:
cryo-EM structure of CPSF160-WDR33-ZC3H18
Method: single particle / : Kuhn CC, Chand MK, Todesca S, Williams K, Keidel A, Garland W, Jensen TH, Conti E

EMDB-44633:
Cryo-EM structure of apo NVL
Method: single particle / : Cruz VE, Erzberger JP

EMDB-44634:
Cryo-EM structure of NVL bound the the MM017 inhibitor
Method: single particle / : Cruz VE, Erzberger JP

EMDB-52570:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-52571:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1i:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1j:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9omg:
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-48093:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

EMDB-48101:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

EMDB-48102:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70264:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

PDB-9eit:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

PDB-9eje:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

PDB-9ejf:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

PDB-9o9v:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

EMDB-46824:
Polyclonal immune complex of human subject 321-2006 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46825:
Polyclonal immune complex of human subject 321-2009 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46827:
Polyclonal immune complex of human subject 321-2012 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46829:
Polyclonal immune complex of Fab from Cynomolgus Macaque 6974 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46830:
Polyclonal immune complex of Fab from Rhesus Macaque BB798E at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46831:
Polyclonal immune complex of Fab from Cynomolgus Macaque T009 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46832:
Polyclonal immune complex of Fab from Cynomolgus Macaque R996 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjy:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjz:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-43507:
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing intact human antibody EEEV-373
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-43980:
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing human antibody IgG EEEV-373
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-8vsv:
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing intact human antibody EEEV-373
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

PDB-9ay1:
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing human antibody IgG EEEV-373
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-46604:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

EMDB-46605:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46606:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46613:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 Fab bound
Method: single particle / : Parsons RJ, Acharya P

EMDB-46614:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 Fabs bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7g:
BG505 DS-SOSIP.664 apo structure from the CH103 KN cryo-EM dataset
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7h:
Cryo-EM structure of BG505 DS-SOSIP.664 with 1 CH103 KN Fab bound
Method: single particle / : Parsons RJ, Acharya P

PDB-9d7i:
Cryo-EM structure of BG505 DS-SOSIP.664 with 2 CH103 KN Fabs bound
Method: single particle / : Parsons RJ, Acharya P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more