[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 678 items for (author: white & ma)

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-51930:
BAM-hinge (LVPR)
Method: single particle / : Machin JM, Ranson NA

EMDB-51931:
BAM-hinge (GSGS)
Method: single particle / : Machin JM, Ranson NA

EMDB-51933:
BAM-hinge (LVPR) suppressor (T434A)
Method: single particle / : Machin JM, Ranson NA

PDB-9h84:
BAM-hinge (LVPR)
Method: single particle / : Machin JM, Ranson NA

PDB-9h85:
BAM-hinge (GSGS)
Method: single particle / : Machin JM, Ranson NA

PDB-9h89:
BAM-hinge (LVPR) suppressor (T434A)
Method: single particle / : Machin JM, Ranson NA

EMDB-72086:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BCL6-760 (LDD, local refined)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-9q03:
Cryo-EM structure of ternary complex BCL6-CRBN-DDB1 with BCL6-760 (LDD, local refined)
Method: single particle / : Zhu J, Fang W, Pagarigan B

PDB-8rlm:
TRIF Oligomerisation
Method: helical / : Moncrieffe MC, Verstak B, Whitely L, Symmoms MF, Soares SG, Egelman EH, Klenerman D, Bryant CE, Gay NJ

EMDB-49208:
Consensus map of the autoinhibitory unliganded CD163 trimer (map A)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49209:
Local map of the autoinhibitory unliganded CD163 trimer (map B)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49210:
Local map of the autoinhibitory unliganded CD163 trimer (map C)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49211:
Local map of the autoinhibitory unliganded CD163 trimer (map D)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49212:
Local map of the autoinhibitory unliganded CD163 trimer (map E)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49213:
Composite map of the autoinhibitory unliganded CD163 trimer (map F)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49214:
Consensus map of the CD163/Hp(1-1)Hb complex (Map G)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49215:
Local map of the CD163/Hp(1-1)Hb complex (Map H)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49216:
Local map of the CD163/Hp(1-1)Hb complex (Map I)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49217:
Local map of the CD163/Hp(1-1)Hb complex (Map J)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49218:
Composite map of the CD163/Hp(1-1)Hb complex (Map K)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49219:
Consensus map of the CD163/HpSPHb complex (Map L)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49220:
Local map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

EMDB-49221:
Composite map of the CD163/HpSPHb complex (Map M)
Method: single particle / : Huang CS, White JBR, Degtjarik O

PDB-9nb5:
Cryo-EM structure of the autoinhibitory CD163 trimer
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb6:
Cryo-EM structure of the CD163/Hp(1-1)Hb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

PDB-9nb8:
Cryo-EM structure of the CD163/HpSPHb complex
Method: single particle / : Huang CS, White JBR, Degtjarik O, Mosyak L

EMDB-47972:
VIP3Cb1 Toxin structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

EMDB-47974:
VIP3Cb1 Protoxin Structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

PDB-9efg:
VIP3Cb1 Toxin structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

PDB-9efi:
VIP3Cb1 Protoxin Structure
Method: single particle / : Rau MJ, Rydel T, Zheng M, White T

EMDB-44925:
Structure of the LM189-Bound beta2AR-Gi Complex
Method: single particle / : Casiraghi M, Wang H, Kobilka BK

PDB-9buy:
Structure of the LM189-Bound beta2AR-Gi Complex
Method: single particle / : Casiraghi M, Wang H, Kobilka BK

EMDB-46656:
Mycobacteriophage Bxb1 tail tip - Consensus C3 map
Method: single particle / : Freeman KG

EMDB-46657:
Mycobacteriophage Bxb1 tail tip - Tail spike C1 local refinement
Method: single particle / : Freeman KG

EMDB-46658:
Mycobacteriophage Bxb1 tail tip - Tail wings C1 local refinement
Method: single particle / : Freeman KG

EMDB-46659:
Mycobacteriophage Bxb1 tail tip - Tail collar and fibers C1 local refinement
Method: single particle / : Freeman KG

EMDB-48066:
Subtomogram averaging of Bxb1 phage tail tip (infection state)
Method: subtomogram averaging / : Park D, Mondal S

EMDB-48067:
Subtomogram averaging of Bxb1 phage tail tip (infection state, extra density within cell wall)
Method: subtomogram averaging / : Park D, Mondal S

EMDB-46908:
Recombinant AD-fold Paired Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-46915:
Recombinant AD-fold Quadruple Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-46870:
Recombinant AD PHF
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-46885:
AD-fold Tri Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Kunach P, Diamond MI

EMDB-46909:
Recombinant AD-fold Paired Helical Filament II Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-46911:
Recombinant AD-fold Triple Helical Filament Polymorph
Method: helical / : Vaquer-Alicea J, Diamond MI, Kunach P

EMDB-19013:
CryoEM structure of the primed actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

EMDB-19030:
CryoEM structure of the post-powerstroke actomyosin-5a complex
Method: single particle / : Klebl DP, McMillan SN, Risi C, Forgacs E, Virok B, Atherton JL, Stofella M, Winkelmann DA, Sobott F, Galkin VE, Knight PJ, Muench SP, Scarff CA, White HD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more