[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,264 items for (author: ward & a)

EMDB-76291:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

PDB-12bp:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

EMDB-71880:
NorA in outward-open conformation bound to inhibitor IMP2380
Method: single particle / : Suwatthee T, Gray JL, Ledger EVK, Wang D, Edwards A, Tate EW, Traaseth NJ

PDB-9pv0:
NorA in outward-open conformation bound to inhibitor IMP2380
Method: single particle / : Suwatthee T, Gray JL, Ledger EVK, Wang D, Edwards A, Tate EW, Traaseth NJ

EMDB-72694:
Cryo-EM structure of wild-type human CNNM4 tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-72696:
Cryo-EM structure of human CNNM4(D262C) tetramer with Magnesium and MgATP in occluded state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-72697:
Cryo-EM structure of human CNNM4(K113A/R140A/R141A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-75682:
Cryo-EM structure of human CNNM4(E284A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou XE, Lu W, Du J

PDB-11gq:
Cryo-EM structure of human CNNM4(E284A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou XE, Lu W, Du J

PDB-9y9d:
Cryo-EM structure of wild-type human CNNM4 tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

PDB-9y9f:
Cryo-EM structure of human CNNM4(D262C) tetramer with Magnesium and MgATP in occluded state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

PDB-9y9g:
Cryo-EM structure of human CNNM4(K113A/R140A/R141A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-74063:
BG505 MD39.3 Env gp151 MPER nanodisc in complex with DH511.2, BG18, and VRC01 Fabs
Method: single particle / : Rantalainen R, Ozorowski G, Ward AB

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76879:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA)
Method: subtomogram averaging / : Park D

EMDB-76880:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA-complemented)
Method: subtomogram averaging / : Park D

EMDB-76881:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin treated)
Method: subtomogram averaging / : Park D

EMDB-76882:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76883:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin + pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76884:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (wt)
Method: subtomogram averaging / : Park D

EMDB-71419:
KL-H15-3G11 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-71420:
KL-H15-6H4 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-71421:
KL-H15-6G8 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-71422:
07-5G01 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-71424:
KL-H15-6F6 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-71480:
Negative stain map of H15 HA (A/wedge-tailed shearwater/Western Australia/2576/1979) in complex with monoclonal Fab 6G8
Method: single particle / : Leon AN, Bhavsar D, Han JH, Ward AB

EMDB-71481:
Negative stain map of H15 HA (A/wedge-tailed shearwater/Western Australia/2576/1979) in complex with monoclonal Fab 3G11
Method: single particle / : Leon AN, Bhavsar D, Han JH, Ward AB

EMDB-71482:
Negative stain map of H15 HA (A/wedge-tailed shearwater/Western Australia/2576/1979) in complex with monoclonal Fab 6F6
Method: single particle / : Leon AN, Bhavsar D, Han JH, Ward AB

PDB-9p9q:
KL-H15-3G11 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

PDB-9p9r:
KL-H15-6H4 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

PDB-9p9s:
KL-H15-6G8 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

PDB-9p9t:
07-5G01 Fab in complex with soluble A/wedge-tailed shearwater/Western Australia/2576/1979 H15 hemagglutinin trimer
Method: single particle / : Leon AN, Ferguson JA, Han JH, Ward AB

EMDB-72934:
HCoV-HKU1 C S 2P in complex with H501-008 Fab (global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72935:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 1, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72936:
HuCoV-HKU1 C S 2P in complex with H501-018 Fab (State 2, global cryoEM)
Method: single particle / : Vasquez S, Barnes CO

EMDB-72937:
HCoV-HKU1 C S 2P in complex with H501-018 Fab (local cryoEM)
Method: single particle / : Vasquez S, Barnes CO

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more