[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 490 items for (author: wang & pp)

EMDB-64462:
Cryo-EM structure of the Prohibitin complex from Chaetomium thermophilum
Method: single particle / : Luo DY, Zheng LQ, Lu MA, Chen ZY, Wang PP, Guo Q, Gao N

EMDB-56516:
In situ Dictyostelium discoideum cytosolic vault
Method: subtomogram averaging / : Geissler K, Kreysing JP, Beck M

EMDB-71739:
Legionella Dot/Icm T4SS
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-72186:
Focused refinement map of the periplasmic part of the Legionella pneumophila T4SS.
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-72187:
Focused refinement map of the cytoplasmic region of the Legionella pneumophila T4SS.
Method: subtomogram averaging / : Dutka P, Liu Y, Maggi S, Jensen GJ

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-63770:
Cryo-EM structure of Gi-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63771:
Cryo-EM structure of complex of transducer-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63772:
Cryo-EM structure of antagonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63773:
Cryo-EM structure of agonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

EMDB-63774:
Cryo-EM structure of Apo-GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH, Sun JP

PDB-9mb9:
Cryo-EM structure of Gi-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH

PDB-9mba:
Cryo-EM structure of complex of transducer-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH

PDB-9mbb:
Cryo-EM structure of antagonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH

PDB-9mbc:
Cryo-EM structure of agonist-bound GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH

PDB-9mbd:
Cryo-EM structure of Apo-GPCR
Method: single particle / : Zhao J, Zhao C, Sun H, Shao ZH

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8d:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8e:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-62471:
Cryo-EM structure of PsCas9-sgRNA binary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Gut RT

EMDB-62479:
Cryo-EM structure of PsCas9-sgRNA-dsDNA ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-63976:
Cryo-EM structure of PsCas9-sgRNA-dsDNA (30 nt) ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-45193:
V-Shaped, Channel Formed, T2a Nanobody Bound conformation of wild-type human CFTR (sharpened map from cryoSPARC non-uniform refinement)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-46916:
Cryo-EM structure of the heme/hemoglobin transporter ChuA, in complex with de novo designed binder G7
Method: single particle / : Fox D, Venugopal H, Lupton CJ, Spicer BA, Grinter R

EMDB-46917:
Cryo-EM structure of the heme/hemoglobin transporter ChuA, in complex with de novo designed binder H3
Method: single particle / : Fox D, Venugopal H, Lupton CJ, Spicer BA, Grinter R

PDB-9dir:
Cryo-EM structure of the heme/hemoglobin transporter ChuA, in complex with de novo designed binder G7
Method: single particle / : Fox D, Venugopal H, Lupton CJ, Spicer BA, Grinter R

PDB-9dis:
Cryo-EM structure of the heme/hemoglobin transporter ChuA, in complex with de novo designed binder H3
Method: single particle / : Fox D, Venugopal H, Lupton CJ, Spicer BA, Grinter R

EMDB-44945:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking local map
Method: single particle / : Gumpper RH, Wang L, Kapolka N, Skiniotis G, Roth BL

EMDB-44946:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking, local refinement of heterotrimer
Method: single particle / : Gumpper RH, Wang L, Kapolka N, Skiniotis G, Roth BL

EMDB-44961:
5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking global map
Method: single particle / : Gumpper RH, Wang L, Kapolka N, Skiniotis G, Roth BL

EMDB-47700:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-49564:
cryoEM structure of human ACKR3 phosphorylated by GRK2 in complex with Arr2
Method: single particle / : Chen Q, Tesmer JJG

PDB-9e82:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-61553:
Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.1)
Method: single particle / : Qi Y, Zhang S, Sodroski J, Mao Y

EMDB-61554:
Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.2)
Method: single particle / : Qi Y, Zhang S, Sodroski J, Mao Y

PDB-9jkf:
Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.1)
Method: single particle / : Qi Y, Zhang S, Sodroski J, Mao Y

PDB-9jkg:
Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.2)
Method: single particle / : Qi Y, Zhang S, Sodroski J, Mao Y

EMDB-46715:
MERS NTD-specific polyclonal antibodies
Method: single particle / : Ward AB, Bangaru S

EMDB-41290:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41291:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41292:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41289:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin2 in nanodisc
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41295:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41296:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41297:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-43277:
cryoEM structure of human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 variant with the C edge loop from Arrestin2 inserted
Method: single particle / : Chen Q, Tesmer JJG

PDB-8tii:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin2 in nanodisc
Method: single particle / : Chen Q, Tesmer JJG

PDB-8til:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more