[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,302 items for (author: thomas & c)

EMDB-73662:
Structure of Mosaic -5 IDD NPs
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73675:
Structure of SS-L2-I53-50NP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73668:
Structure of SS-L2-FerritinNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73671:
Structure of SS-L2-LuSNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-71076:
Human liver phosphofructokinase-1 bound to XJ-4-85
Method: single particle / : Lynch EM, Jiang X, Hsu KL, Kollman JM

PDB-9p0j:
Human liver phosphofructokinase-1 bound to XJ-4-85
Method: single particle / : Lynch EM, Jiang X, Hsu KL, Kollman JM

EMDB-59152:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

PDB-32to:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

EMDB-49111:
Yeast TIM23 complex inhibited by stendomycin
Method: single particle / : Park E

PDB-9n84:
Yeast TIM23 complex inhibited by stendomycin
Method: single particle / : Park E

EMDB-54981:
GABA-A a4b3d receptor in complex with GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-54987:
GABA-A a4b3d receptor in complex with DS2-Me, GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-55007:
GABA-A a4b3d receptor in complex with GABA and Nb24
Method: single particle / : Nestorow S, Miller PS

PDB-9sl1:
GABA-A a4b3d receptor in complex with GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

PDB-9sld:
GABA-A a4b3d receptor in complex with DS2-Me, GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

PDB-9slm:
GABA-A a4b3d receptor in complex with GABA and Nb24
Method: single particle / : Nestorow S, Miller PS

EMDB-55116:
Symmetry relaxed reconstruction of Rhodospirillum rubrum encapsulin:encapsulated ferritin nanocompartment
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

EMDB-59321:
Single particle reconstruction of Rhodospirillum rubrum encapsulated ferritin in encapsulin nano compartment
Method: single particle / : Marles-Wright J, McIver Z, Ross J, McCorvie T, Basle A

PDB-33bf:
Single particle reconstruction of Rhodospirillum rubrum encapsulated ferritin in encapsulin nano compartment
Method: single particle / : Marles-Wright J, McIver Z, Ross J, McCorvie T, Basle A

PDB-9sqr:
Symmetry relaxed reconstruction of Rhodospirillum rubrum encapsulin:encapsulated ferritin nanocompartment
Method: single particle / : McIver Z, McCorvie TJ, Basle A, Marles-Wright J

EMDB-73600:
SARS-CoV-2 SL5 rotated junction
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

PDB-9yx9:
SARS-CoV-2 SL5 rotated junction
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

EMDB-56251:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - monomer
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56252:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 1
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56253:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 2
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56254:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 3
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56255:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 4
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56256:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 5
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-56257:
CryoEM structure of DruH from Druantia type III
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tu7:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - monomer
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tu8:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 1
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tu9:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 2
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tua:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 3
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tub:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 4
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tuc:
CryoEM structure of DruE:ATPgammaS:DNA from Druantia type III - dimer 5
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

PDB-9tud:
CryoEM structure of DruH from Druantia type III
Method: single particle / : Grass LM, Himpich S, Hilal T, Loll B, Wahl MC

EMDB-76291:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

PDB-12bp:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

EMDB-73601:
BtCoV SL5 with SL5c truncated
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

PDB-9yxa:
BtCoV SL5 with SL5c truncated
Method: single particle / : Kretsch RC, Xu L, Chiu W, Das R

EMDB-56538:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

PDB-28iz:
Structure of the human two pore domain potassium ion channel TASK-3 L122V mutant (K2P9.1)
Method: single particle / : Hall PR, Rodstrom KEJ, Tucker SJ

EMDB-54637:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54638:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54639:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54640:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55836:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with peptidyl-tRNA (P)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55837:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in classical pre-translocation state (AP)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55838:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in late hybrid state (H2)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7b:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more