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Showing 1 - 50 of 2,610 items for (author: tan & q)

EMDB-82115:
In Situ Subtomogram Average of the 80S Ribosome in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82118:
In Situ Subtomogram Average of the 60S Ribosomal Subunit in Rat Hippocampal Synapses
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82119:
In Situ Subtomogram Average of the Free 60S Ribosomal Subunit in the Soma of Rat Hippocampal Neuron
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-82120:
In Situ Subtomogram Average of the 80S Ribosome in the Soma of Rat Hippocampal Neurons
Method: subtomogram averaging / : Xia YN, Yan YT, Si Z, Wu J, Gu ML, Tian CL, Lu ZH, Liu S, Huang WL, Tang PP, Rong CYL, Liu YT, Zhou ZH, Zhang XK, Wang PY, Lau PM, Bi GQ, Tao CL

EMDB-72245:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72246:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72247:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72249:
Rad55-Rad57-SHU-Rad51-Rad51 bound to ssDNA with AMP-PNP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72252:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72253:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72254:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72259:
Rad55-Rad57(E161Q)-SHU-Rad51-Rad51 bound to ssDNA with ATP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72261:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on Rad55/Rad57
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72262:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on SHU
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72263:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Local map focused on Rad51
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72264:
Rad55-Rad57(E161Q)-SHU-3xRad51 bound to ssDNA with ATP. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-72270:
Rad55-Rad57-SHU homologous recombination complex. Composite map
Method: single particle / : Yatskevich S, Koo CW, Ciferri C

EMDB-80447:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus L protein (apo form)
Method: single particle / : Jia H, Liu S, Gong P

EMDB-80448:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus L protein (5'-cRNA-bound form)
Method: single particle / : Jia H, Liu S, Gong P

EMDB-80449:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus full-length L protein RdRP elongation complex (EC14 form)
Method: single particle / : Jia H, Tang B, Gong P

EMDB-80450:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus full-length L protein RdRP elongation complex (EC14b form)
Method: single particle / : Jia H, Tang B, Gong P

EMDB-58600:
Cryo-EM map of the acetyl-CoA decarbonylase/synthase (ACDS) complex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

EMDB-58601:
Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

PDB-31ox:
Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
Method: single particle / : Zimmer E, Reif-Trauttmansdorff T, Schuller JM

EMDB-56597:
Tau filament with D252V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56599:
Tau filament with G272V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56600:
Tau filament with delG389_I392 mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-56601:
Tau filament with S320F mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lj:
Tau filament with D252V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lo:
Tau filament with G272V mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lp:
Tau filament with delG389_I392 mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

PDB-28lq:
Tau filament with S320F mutation
Method: helical / : Qi C, Lovestam S, Scheres HWS, Goedert M

EMDB-55847:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

PDB-9tey:
DalDro bound to the terminating Escherichia coli 70S ribosome
Method: single particle / : Berger MJ, Safdari HA, Wilson DN

EMDB-65593:
Cryo-EM structure of vanadate-trapped LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

PDB-9w37:
Cryo-EM structure of vanadate-trapped LolDF in Acinetobacter baumannii
Method: single particle / : Zhang S, Li Y, Liao M

EMDB-73877:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73882:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73883:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7q:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7v:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7x:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-65376:
The structure of ITN bound OXGR1
Method: single particle / : Su Q, Liang EY, Ma TS, Chen ZY, Tang XF

PDB-9vv6:
The structure of ITN bound OXGR1
Method: single particle / : Su Q, Liang EY, Ma TS, Chen ZY, Tang XF

EMDB-65370:
The structure of akg bound OXGR1
Method: single particle / : Su Q, Liang EY, Ma TS, Chen ZY, Tang XF

PDB-9vus:
The structure of akg bound OXGR1
Method: single particle / : Su Q, Liang EY, Ma TS, Chen ZY, Tang XF

EMDB-54410:
Icosahedral reconstruction of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54411:
Chikungunya virus-like particle trimer 1
Method: single particle / : Song X, Kim YC, Huiskonen JT

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