[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,603 items for (author: su & t)

EMDB-38466:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex: RhoG/DOCK5/ELMO1 focused map
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60136:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60146:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 1)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60147:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 2)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60148:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 3)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60149:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 4)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-60150:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 5)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8xm7:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex: RhoG/DOCK5/ELMO1 focused map
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zj2:
Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zji:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 1)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjj:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 2)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjk:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 3)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjl:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 4)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

PDB-8zjm:
Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 5)
Method: single particle / : Kukimoto-Niino M, Katsura K, Ishizuka-Katsura Y, Mishima-Tsumagari C, Yonemochi M, Inoue M, Nakagawa R, Kaushik R, Zhang KYJ, Shirouzu M

EMDB-50296:
70S Escherichia coli ribosome with P-site initiatior tRNA.
Method: single particle / : Koller TO, Wilson DN

PDB-8wt9:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt8:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt7:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

PDB-8wt6:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37830:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37829:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37828:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-37827:
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Method: single particle / : Hiraizumi M, Yamashita K, Nishimasu H

EMDB-36635:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Method: single particle / : Yamaguchi H, Numoto N, Suzuki H, Nishikawa K, Kamegawa A, Takahashi K, Sugiki M, Fujiyoshi Y

PDB-8jt7:
Structure of arginine oxidase from Pseudomonas sp. TRU 7192
Method: single particle / : Yamaguchi H, Numoto N, Suzuki H, Nishikawa K, Kamegawa A, Takahashi K, Sugiki M, Fujiyoshi Y

EMDB-60269:
Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the steady stage of reaction
Method: single particle / : Wakabayashi T, Nakasako M

EMDB-41874:
CryoEM structure of A/Solomon Islands/3/2006 H1 HA in complex with 05.GC.w2.3C10-H1_SI06
Method: single particle / : Moore N, Han J, Ward AB, Wilson IA

EMDB-50068:
Electron tomogram of ER-nuclear envelope junction of HeLa cell in interphase
Method: electron tomography / : Bragulat-Teixidor H, Otsuka S

EMDB-50110:
Electron tomogram of ER-nuclear envelope junction of HeLa cell in early telophase
Method: electron tomography / : Bragulat-Teixidor H, Otsuka S

EMDB-50115:
Electron tomogram of ER-ER junction of HeLa cell in interphase
Method: electron tomography / : Bragulat-Teixidor H, Otsuka S

EMDB-50134:
Electron tomogram of ER-ER/nuclear envelope junction of HeLa cell in late anaphase
Method: electron tomography / : Bragulat-Teixidor H, Otsuka S

EMDB-37249:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Method: single particle / : Fang XY, Zhao GX, Zeng MS, Liu Z

PDB-8khr:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Method: single particle / : Fang XY, Zhao GX, Zeng MS, Liu Z

EMDB-38216:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

PDB-8xbf:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with antibody O5C2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-36694:
cryo-EM structure of rat megalin bodyB
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36695:
Cryo-EM structure of rat megalin wingA
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36697:
Cryo-EM structure of rat megalin leg
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36698:
rat megalin RAP complex head
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36699:
rat megalin RAP complex bodyA
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36700:
rat megalin RAP complex bodyB
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36701:
rat megalin RAP complex wingA
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36702:
rat megalin RAP complex wingB
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

EMDB-36703:
rat megalin RAP complex leg
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

PDB-8jut:
rat megalin RAP complex
Method: single particle / : Goto S, Tsutsumi A, Lee Y, Hosojima M, Kabasawa H, Komochi K, Yun-san L, Nagatoshi S, Tsumoto K, Nishizawa T, Kikkawa M, Saito A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more