[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 18,757 items for (author: su & g)

EMDB-75011:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

PDB-9zzo:
MP1104-bound Kappa Opioid Receptor in complex with beta-arrestin1
Method: single particle / : Han J, Chen M, Che T

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-67612:
Cryo-EM structure of monomeric Cu/Zn-superoxide dismutase from dog (Canis familiaris) complexed with 19A9 triabody in the closed conformation
Method: single particle / : Shino Y, Furukawa Y, Muraki N

EMDB-67613:
Cryo-EM structure of monomeric Cu/Zn-superoxide dismutase from dog (Canis familiaris) complexed with 19A9 triabody in the open conformation
Method: single particle / : Shino Y, Furukawa Y, Muraki N

PDB-21en:
Cryo-EM structure of monomeric Cu/Zn-superoxide dismutase from dog (Canis familiaris) complexed with 19A9 triabody in the closed conformation
Method: single particle / : Shino Y, Furukawa Y, Muraki N

PDB-21eo:
Cryo-EM structure of monomeric Cu/Zn-superoxide dismutase from dog (Canis familiaris) complexed with 19A9 triabody in the open conformation
Method: single particle / : Shino Y, Furukawa Y, Muraki N

EMDB-74618:
cryoEM structure of hexametric HtrA from Borrelia burgdorferi with bound peptides in the active sites
Method: single particle / : Shakya AK, Herzberg O

PDB-9zrj:
cryoEM structure of hexametric HtrA from Borrelia burgdorferi with bound peptides in the active sites
Method: single particle / : Shakya AK, Herzberg O

EMDB-73305:
Cryo-EM structure of the EBV 1/2 DS bound to the EBNA1 DBD, TRF2, and Rap1
Method: single particle / : Sustek S, Messick TE, Murakami K, Lieberman PM

EMDB-71994:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

PDB-9pxt:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

EMDB-65360:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65361:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-65362:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vue:
Structure of human proteasome ATPase-CP intermediate assembles with 15min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vuf:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

PDB-9vug:
Structure of human proteasome ATPase-CP intermediate assembles with 90min rapaprotin addition
Method: single particle / : Wang WL, Yin DY, Mao YD

EMDB-73755:
Cryo-EM structure of human TRPM4 channel in the warm conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73756:
Cryo-EM structure of human TRPM4 channel in the cold conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-66073:
PSI complex of A.thaliana isolated using DOC based Clear-Native-PAGE method
Method: single particle / : Kawamoto A, Seki S, Kurisu G

PDB-9wls:
PSI complex of A.thaliana isolated using DOC based Clear-Native-PAGE method
Method: single particle / : Kawamoto A, Seki S, Kurisu G

EMDB-72125:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-72280:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-74405:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q1e:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q6o:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9zlk:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-70905:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

PDB-9ovp:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

EMDB-65599:
Cryo-EM structure of the human beta2-adrenergic receptor in complex with a novel antagonist
Method: single particle / : Xu T, Liu X

PDB-9w3f:
Cryo-EM structure of the human beta2-adrenergic receptor in complex with a novel antagonist
Method: single particle / : Xu T, Liu X

EMDB-54790:
Cryo-EM structure of the Arabidopsis thaliana 40S ribosomal subunit (Head)
Method: single particle / : Sudeep K, Lu X, Paatero AO, Ruonala R, Tranter D, Guryanov S, Rehan S, Hellmann E, Haakonsson A, Butcher SJ, Huiskonen JT, Kajander T, Helariutta Y, Paavilainen VO

PDB-9sdq:
Cryo-EM structure of the Arabidopsis thaliana 40S ribosomal subunit (Head)
Method: single particle / : Sudeep K, Lu X, Paatero AO, Ruonala R, Tranter D, Guryanov S, Rehan S, Hellmann E, Haakonsson A, Butcher SJ, Huiskonen JT, Kajander T, Helariutta Y, Paavilainen VO

EMDB-64974:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT Consensus map
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-64975:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT_TM_Local Refinment
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-64976:
Cryo-EM structure of the aspartate:alanine antiporter AspT WT_SD_Local refinement
Method: single particle / : Nanatani K, Kanno R, Kawabata T, Watanabe S, Hidaka M, Yamanaka T, Toda K, Fujiki T, Kunii K, Miyamoto A, Chiba F, Ogasawara S, Murata T, Humbel BM, Inaba K, Mitsuoka K, Guan L, Abe K, Yamamoto M, Koshiba S

EMDB-73754:
Cryo-EM structure of human TRPM4 channel in complex with calcium and TPPO at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73758:
Cryo-EM structure of human TRPM4 channel in complex with EGTA and TPPO at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73761:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73762:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA at 37 degrees Celsius (monomeric TMD-focused map with best-resolved CBA density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73763:
Cryo-EM structure of human TRPM4 channel in complex with calcium and NBA at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73764:
Cryo-EM structure of human TRPM4 channel in complex with calcium and NBA at 37 degrees Celsius (monomeric TMD-focused map with best-resolved NBA density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73765:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA and DVT at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-63783:
Cryo-EM structure of human FcRL4 bound to IgA-Fc/J
Method: single particle / : Wang YX, Su C, Xiao JY

PDB-9mbz:
Cryo-EM structure of human FcRL4 bound to IgA-Fc/J
Method: single particle / : Wang YX, Su C, Xiao JY

EMDB-65185:
HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation2 splitRNA
Method: single particle / : Yang B, Wang Q, Sun SW, Zhang X

PDB-9vmd:
HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation2 splitRNA
Method: single particle / : Yang B, Wang Q, Sun SW, Zhang X

EMDB-71089:
MscS in Glyco-DIBMA Native Nanodiscs (C1 symmetry)
Method: single particle / : Moller E, Britt M, Zhou F, Yang H, Anishkin A, Ernst R, Juan VM, Sukharev S, Matthies D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more