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Showing all 46 items for (author: shen & yp)

EMDB-36960:
F8-A22-E4 complex of MPXV in complex with DNA and Ara-CTP
Method: single particle / : Shen YP, Li YN, Yan RH

EMDB-36962:
F8-A22-E4 complex of MPXV in complex with DNA and dCTP
Method: single particle / : Shen YP, Li YN, Yan RH

EMDB-36963:
the local map of DNA and Ara-CTP binding site
Method: single particle / : Shen YP, Li YN, Yan RH

EMDB-36964:
the local map of DNA and dCTP binding site
Method: single particle / : Shen YP, Li YN, Yan RH

EMDB-36202:
Cryo-EM structure of alpha-synuclein gS87 fibril
Method: helical / : Xia WC, Sun YP, Liu C, Tao YQ

EMDB-36203:
Cryo-EM structure of alpha-synuclein pS87 fibril
Method: helical / : Xia WC, Sun YP, Liu C, Tao YQ

EMDB-35264:
S-ECD (Omicron BA.2.75) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35266:
S-ECD (Omicron BF.7) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35267:
S-ECD (Omicron XBB.1) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35269:
S-RBD (Omicron BA.2.75) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35270:
S-RBD (Omicron BF.7) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35272:
S-RBD (Omicron XBB.1) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35268:
S-RBD(Omicron BA.3) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-35254:
ACE2-SIT1 complex bound with proline
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35255:
ACE2-B0AT1 complex bound with glutamine
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35256:
ACE2-B0AT1 complex bound with methionine
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35260:
Cryo-EM map of the ACE2-SIT1 complex bound with proline, focused refined on extracellular region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35261:
cryo-EM map of the ACE2-SIT1 complex bound with proline, focused refined on transmembrane region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35262:
cryo-EM map of the ACE2-B0AT1 complex bound with glutamine, focused refined on extracellular region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35265:
cryo-EM map of the ACE2-B0AT1 complex bound with glutamine, focused refined on transmembrane region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35271:
cryo-EM map of the ACE2-B0AT1 complex bound with methionine, focused refined on extracellular region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-35273:
cryo-EM map of the ACE2-B0AT1 complex bound with methionine, focused refined on transmembrane region
Method: single particle / : Li YN, Zhang YY, Shen YP, Yan RH

EMDB-33577:
S-ECD (Omicron BA.3) in complex with two PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33578:
S-ECD (Omicron BA.5) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33575:
S-ECD (Omicron BA.2) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33576:
S-ECD (Omicron BA.3) in complex with three PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33579:
map focused on the interface between BA.2 RBD and ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33580:
map focused on the interface between BA.3 RBD and ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33581:
map focused on the interface between BA.4 RBD and ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-34885:
F8-A22-E4 complex in hexameric form local map
Method: single particle / : Li YN, Shen YP, Hu ZW, Yan RH

EMDB-34886:
F8-A22-E4 complex of MPXV in hexameric form
Method: single particle / : Li YN, Shen YP, Hu ZW, Yan RH

EMDB-34887:
F8-A22-E4 complex of MPXV in trimeric form
Method: single particle / : Li YN, Shen YP, Hu ZW, Yan RH

EMDB-33653:
SIT1-ACE2-BA.5 RBD
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33656:
Local map of the interface of ACE2 and BA.5 RBD
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33657:
TM domain of SIT1
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33652:
SIT1-ACE2-BA.2 RBD
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33654:
Local map of ACE2 and BA.2 interface
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33655:
TM domain of SIT1
Method: single particle / : Shen YP, Li YN, Zhang YY, Yan RH

EMDB-33202:
S-ECD (Omicron) in complex with STS165
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33203:
S-ECD (Omicron) in complex with PD of ACE2
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33204:
S-ECD (Omicron) in complex with PD of ACE2 focused on RBD_PD sub-complex
Method: single particle / : Li YN, Shen YP, Zhang YY, Yan RH

EMDB-33054:
Cryo-EM structure of the TMEM106B fibril from normal elder
Method: helical / : Xia WC, Zhao QY, Fan Y, Sun YP, Tao YQ, Liu C

EMDB-33055:
Cryo-EM structure of the TMEM106B fibril from Parkinson's disease dementia
Method: helical / : Zhao QY, Xia WC, Fan Y, Sun YP, Tao YQ, Liu C

EMDB-31249:
S protein of SARS-CoV-2 in complex with GW01
Method: single particle / : Shen YP, Zhang YY, Yan RH, Li YN, Zhou Q

EMDB-31250:
Local map of S protein of SARS-CoV-2 in complex with GW01 Focused on RND-GW01 sub_complex
Method: single particle / : Shen YP, Zhang YY

EMDB-32092:
Cryo-EM structure of amyloid fibril formed by FUS low complexity domain
Method: helical / : Sun YP, Xia WC

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About EMN search

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News

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

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Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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