[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,205 items for (author: shao & w)

EMDB-61187:
T.acidophilum 20S proteasome
Method: single particle / : Shao X, Tian M

EMDB-61526:
Cryo-EM structure of RHDV GI.2 virion
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

EMDB-61527:
Cryo-EM structure of a T=1 VLP of RHDV GI.2 with N-terminal 1-37 residues truncated
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

EMDB-61528:
Local refinement of RHDV GI.2 T=1 VLP
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

EMDB-61529:
Cryo-EM structure of a T=3 VLP of RHDV GI.2
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

PDB-9jjg:
Cryo-EM structure of RHDV GI.2 virion
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

PDB-9jjh:
Cryo-EM structure of a T=1 VLP of RHDV GI.2 with N-terminal 1-37 residues truncated
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

PDB-9jji:
Local refinement of RHDV GI.2 T=1 VLP
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

PDB-9jjj:
Cryo-EM structure of a T=3 VLP of RHDV GI.2
Method: single particle / : Ruan Z, Shao Q, Song Y, Hu B, Fan Z, Wei H, Liu Y, Wang F, Fang Q

EMDB-39188:
Cryo-EM structure of human respiratory syncytial virus fusion protein variant
Method: single particle / : Li QM, Su JG, Zhang J, Liang Y, Shao S, Li XY, Zhao ZX

PDB-8ye3:
Cryo-EM structure of human respiratory syncytial virus fusion protein variant
Method: single particle / : Li QM, Su JG, Zhang J, Liang Y, Shao S, Li XY, Zhao ZX

EMDB-60510:
AtALMT9 plus high malate in low pH
Method: single particle / : Gong DS

PDB-8zvf:
AtALMT9 plus high malate in low pH
Method: single particle / : Gong DS

EMDB-36762:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-36763:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its apo state
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-36765:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its dual-ternary state
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-36774:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to 2-oxoglutarate
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-36787:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to collagen alpha-1(I) chain
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-37097:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to cyclosporin A
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8k0e:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8k0f:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its apo state
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8k0i:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its dual-ternary state
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8k0m:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to 2-oxoglutarate
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8k17:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to collagen alpha-1(I) chain
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

PDB-8kc9:
Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to cyclosporin A
Method: single particle / : Li W, Peng J, Yao D, Rao B, Xia Y, Wang Q, Li S, Cao M, Shen Y, Ma P, Liao R, Qin A, Zhao J, Cao Y

EMDB-42275:
RORC mRNA 3'UTR riboswitch class A
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42276:
RORC mRNA 3'UTR riboswitch class B
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-42277:
RORC mRNA 3'UTR riboswitch class C
Method: single particle / : Asarnow D, Khoroshkin M, Goodarzi H, Cheng Y

EMDB-39820:
Structure of HIV-1 CH119 SOSIP.664 trimer in complex with CD4 molecules
Method: single particle / : Li D, Wang T

PDB-8z7n:
Structure of HIV-1 CH119 SOSIP.664 trimer in complex with CD4 molecules
Method: single particle / : Li D, Wang T

EMDB-38425:
The composite EM map of the Ycf2-FtsHi motor complex from Arabidopsis in ATP-bound state
Method: single particle / : Liang K, Zhan X, Xu Q, Wu J, Yan Z

EMDB-38426:
Overall map of the Ycf2-FtsHi motor complex from Arabidopsis in ATP-bound state
Method: single particle / : Liang K, Zhan X, Wu J, Yan Z

EMDB-38427:
Local EM map of the AtYcf2-FtsHi motor complex in the inter-membrane space region (ATP dataset)
Method: single particle / : Liang K, Zhan X, Wu J, Yan Z

EMDB-38428:
Cryo-EM structure of the Ycf2-FtsHi motor complex from Arabidopsis in Apo state
Method: single particle / : Liang K, Zhan X, Xu Q, Wu J, Yan Z

EMDB-39948:
Cryo-EM Map of Pisum sativum TOC-TIC-Ycf2-FtsHi Ultracomplex
Method: single particle / : Wu J, Yan Z, Li Y, Jin Z, Xu Q

EMDB-60068:
Local EM map of the AtYcf2-FtsHi motor complex in the inter-membrane space region (Apo dataset)
Method: single particle / : Liang K, Zhan X, Wu J, Yan Z

EMDB-60069:
Composite map of the Ycf2-FtsHi motor complex from Arabidopsis in apo state
Method: single particle / : Liang K, Zhan X, Wu J, Yan Z

PDB-8xku:
Cryo-EM structure of the Ycf2-FtsHi motor complex from Arabidopsis in ATP-bound state
Method: single particle / : Liang K, Zhan X, Xu Q, Wu J, Yan Z

PDB-8xkv:
Cryo-EM structure of the Ycf2-FtsHi motor complex from Arabidopsis in Apo state
Method: single particle / : Liang K, Zhan X, Xu Q, Wu J, Yan Z

EMDB-38845:
Icosahedrally averaged cryo-EM reconstruction of PhiKZ capsid before applying the "block-based" reconstruction method
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-38846:
Block 1 of PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-38848:
Block 2 of PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-39002:
Composite cryo-EM map of PhiKZ capsid after applying the "block-based" reconstruction method
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

PDB-8y6v:
Near-atomic structure of icosahedrally averaged jumbo bacteriophage PhiKZ capsid
Method: single particle / : Yang Y, Shao Q, Guo M, Han L, Zhao X, Wang A, Li X, Wang B, Pan J, Chen Z, Fokine A, Sun L, Fang Q

EMDB-39034:
Human AE3 with NaHCO3- and DIDS
Method: single particle / : Jian L, Zhang Q, Yao D, Wang Q, Xia Y, Qin A, Cao Y

EMDB-39035:
Human AE3 with NaHCO3-
Method: single particle / : Jian L, Zhang Q, Yao D, Cao Y

EMDB-39050:
The structure of hAE3
Method: single particle / : Jian L, Zhang Q, Yao D, Wang Q, Xia Y, Qin A, Cao Y

EMDB-60225:
hAE3NTD2TMD with PT5,CLR, and Y01
Method: single particle / : Jian L, Zhang Q, Yao D, Wang Q, Xia Y, Qin A, Cao Y

PDB-8y85:
Human AE3 with NaHCO3- and DIDS
Method: single particle / : Jian L, Zhang Q, Yao D, Wang Q, Xia Y, Qin A, Cao Y

PDB-8y86:
Human AE3 with NaHCO3-
Method: single particle / : Jian L, Zhang Q, Yao D, Cao Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more