[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 776 items for (author: shang & h)

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-67630:
Cryo-EM map of SARS-CoV-2 spike complexed with Fab 12C2
Method: single particle / : Deng Z, Zhao H, Yu F

EMDB-60812:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60813:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60815:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60817:
Cryo-EM Structure of rRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-60819:
Cryo-EM Structure of CRISPR
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9irf:
Cryo-EM Structure of csy1-4 with crRNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9irg:
Cryo-EM Structure of RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

PDB-9iri:
Cryo-EM Structure of D-RNA
Method: single particle / : Gao X, Cui S, Zhu H, Zhu K, Shang K

EMDB-45190:
Yersinia entomophaga holotoxin complex in prepore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45422:
Yersinia entomophaga holotoxin complex in pore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-45423:
Yersinia entomophaga toxin complex TcA subunit
Method: single particle / : Low YS, Landsberg MJ

PDB-9c4k:
Yersinia entomophaga holotoxin complex in prepore conformation
Method: single particle / : Low YS, Landsberg MJ

PDB-9cbc:
Yersinia entomophaga holotoxin complex in pore conformation
Method: single particle / : Low YS, Landsberg MJ

EMDB-52234:
Structure of VHH5 targeting NY-ESO-1(SLLMWITQC)/HLA-A*02:01
Method: single particle / : Jie B, Shenghai C, Liqiang P, Xing Z

EMDB-62800:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with Ace2 constituent map 1
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-62810:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2 constituent map 2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-66121:
Structure of E.coli ribosome in complex with an engineered arrest peptide
Method: single particle / : Sriramoju MK, Ko TP, Draczkowski P, Hsu STD

EMDB-66122:
Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
Method: single particle / : Sriramoju MK, Ko TP, Draczkowski P, Hsu STD

PDB-9wnq:
Structure of E.coli ribosome in complex with an engineered arrest peptide
Method: single particle / : Sriramoju MK, Ko TP, Draczkowski P, Hsu STD

PDB-9wnr:
Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
Method: single particle / : Sriramoju MK, Ko TP, Draczkowski P, Hsu STD

EMDB-44278:
Chimeric flavivirus between BinJV and YFV-17D
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44279:
Chimeric flavivirus between BinJV and YFV-ES504
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44280:
Chimeric flavivirus between BinJV and YFV-17D in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44281:
Chimeric flavivirus between BinJV and YFV-ES504 in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44282:
Chimeric flavivirus between BinJV and YFV-17D in complex with 5A Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44283:
Chimeric flavivirus between BinJV and YFV-ES504 in complex with 5A Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44284:
Chimeric flavivirus between BinJV and YFV-ES504 with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44285:
Chimeric flavivirus between BinJV and YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44286:
Chimeric flavivirus between BinJV and YFV-Asibi with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44287:
Chimeric flavivirus between BinJV and YFV-ES504 T380R
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-44288:
Envelope protein ASU of YFV-17D in complex with 2C9 Fab
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44289:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44290:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44291:
Envelope protein ASU of YFV-Asibi with YFV-17D DIII
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-44292:
Envelope protein ASU of YFV-ES504 T380R
Method: single particle / : Bibby S, James J, Modhiran N, Watterson D

EMDB-49804:
Chimeric flavivirus between BinJV and YFV-Asibi
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

EMDB-49805:
Chimeric flavivirus between BinJV and YFV-Asibi T380R
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

PDB-9b6u:
Envelope protein ASU of YFV-17D in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

PDB-9b6v:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

PDB-9b6w:
Envelope protein ASU of YFV-ES504 with YFV-17D DIII in complex with 2C9 Fab
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

PDB-9b6x:
Envelope protein ASU of YFV-Asibi with YFV-17D DIII
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

PDB-9b6y:
Envelope protein ASU of YFV-ES504 T380R
Method: single particle / : Bibby S, Jung J, Modhiran N, Watterson D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more