[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 603 items for (author: scheres & s)

EMDB-53247:
Tau Paired Helical Filaments using PAD12 for seeding in primary mouse neurons
Method: helical / : Lovestam S, Scheres SHW

EMDB-53461:
Tau (297-391) assembled in the presence of CuCl2
Method: helical / : Lovestam S, Scheres SHW

EMDB-53462:
Tau(297-408 S396D S400D T403D S404D) head to head fold type 1
Method: helical / : Lovestam S, Scheres SHW

EMDB-53463:
Tau(297-391) filaments PHF fold
Method: helical / : Lovestam S, Scheres SHW

EMDB-53464:
Tau(297-408 S396D S400D T403D S404D) head to head fold type 2
Method: helical / : Lovestam S, Scheres SHW

EMDB-54909:
Head to Head tau filament with the Alzheimer's fold
Method: helical / : Scheres SHW, Goedert M

PDB-9shs:
Head to Head tau filament with the Alzheimer's fold
Method: helical / : Scheres SHW, Goedert M

EMDB-54485:
297-441 delta392-395 tau filaments
Method: helical / : Lovestam SL, Scheres SHW

PDB-9s2b:
297-441 delta392-395 tau filaments
Method: helical / : Lovestam SL, Scheres SHW

EMDB-53805:
Major Vault Protein from Human Brain
Method: single particle / : Lovestam SL, Scheres SHW

EMDB-53806:
Cap of the vault protein from Human Brain
Method: single particle / : Lovestam SL, Scheres SHW

PDB-9r86:
Major Vault Protein from Human Brain
Method: single particle / : Lovestam SL, Scheres SHW

PDB-9r87:
Cap of the vault protein from Human Brain
Method: single particle / : Lovestam SL, Scheres SHW

EMDB-53527:
Tau filaments seeded by AD homogenate using 0N3R C322A
Method: helical / : Lovestam S, Scheres HWS

EMDB-53530:
Tau filaments seeded by AD homogenate using 0N3R C322S
Method: helical / : Lovestam S, Scheres HWS

PDB-9r2f:
Tau filaments seeded by AD homogenate using 0N3R C322A
Method: helical / : Lovestam S, Scheres HWS

PDB-9r2h:
Tau filaments seeded by AD homogenate using 0N3R C322S
Method: helical / : Lovestam S, Scheres HWS

EMDB-51884:
PAD12 0N3R:0N4R tau PHF
Method: helical / : Lovestam S, Scheres SHW, Goedert M

EMDB-51886:
PAD12 0N3R tau PHF seeded by AD
Method: helical / : Lovestam S, Scheres SHW, Goedert M

PDB-9h5g:
PAD12 0N3R:0N4R tau PHF
Method: helical / : Lovestam S, Scheres SHW, Goedert M

PDB-9h5j:
PAD12 0N3R tau PHF seeded by AD
Method: helical / : Lovestam S, Scheres SHW, Goedert M

EMDB-50587:
TMEM106B filaments from Biondi bodies (Biondi variant)
Method: helical / : Ghetti B, Schweighauser M, Jacobsen MH, Gray D, Bacioglu M, Murzin AG, Glazier BS, Vidal R, Newell KL, Gao S, Garringer HJ, Spillantini MG, Scheres SHW, Goedert M

PDB-9fnb:
TMEM106B filaments from Biondi bodies (Biondi variant)
Method: helical / : Ghetti B, Schweighauser M, Jacobsen MH, Gray D, Bacioglu M, Murzin AG, Glazier BS, Vidal R, Newell KL, Gao S, Garringer HJ, Spillantini MG, Scheres SHW, Goedert M

EMDB-51319:
P301L tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

EMDB-51320:
P301T type I tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

EMDB-51325:
P301T type II tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

PDB-9gg0:
P301L tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

PDB-9gg1:
P301T type I tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

PDB-9gg6:
P301T type II tau filaments from human brain
Method: helical / : Schweighauser M, Shi Y, Murzin AG, Garringer HJ, Vidal R, Murrell JR, Erro ME, Seelaar H, Ferrer I, van Swieten JC, Ghetti B, Scheres SHW, Goedert M

EMDB-45979:
Cryo-EM filament structure in FTLD-synuclein
Method: helical / : Yang Y, Scheres HWS, Goedert M

PDB-9cx6:
Cryo-EM filament structure in FTLD-synuclein
Method: helical / : Yang Y, Scheres HWS, Goedert M

EMDB-19846:
PHF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

EMDB-19849:
PHF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

EMDB-19852:
PHF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

PDB-9eo7:
PHF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

PDB-9eo9:
SF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

PDB-9eoe:
TF type tau filament from V337M mutant
Method: helical / : Qi C, Scheres SHW, Michel G

EMDB-50672:
A 3.3A sub-tomogram average of HIV-1 CA-SP1 from 5 tomograms in EMPIAR-10164 obtained using RELION 5
Method: subtomogram averaging / : Toader B, Scheres SHW

EMDB-19854:
PHF type tau filament from R406W mutant
Method: helical / : Qi C, Scheres SHW, Michel G

EMDB-19855:
PHF type tau filament from in vitro V337M mutant
Method: helical / : Qi C, Lovestam S, Scheres SHW, Michel G

PDB-9eog:
PHF type tau filament from R406W mutant
Method: helical / : Qi C, Scheres SHW, Michel G

PDB-9eoh:
PHF type tau filament from in vitro V337M mutant
Method: helical / : Qi C, Lovestam S, Scheres SHW, Michel G

EMDB-19926:
CTE type I tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

EMDB-19927:
CTE type II tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

EMDB-19928:
CTE type II tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

PDB-9erm:
CTE type I tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

PDB-9ern:
CTE type II tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

PDB-9ero:
CTE type III tau filament from vacuolar tauopathy
Method: helical / : Qi C, Scheres HWS, Goedert M

EMDB-17171:
CTE typeI tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

EMDB-17173:
CTE typeIII tau filament from Guam ALS/PDC
Method: helical / : Qi C, Yang S, Scheres SHW, Goedert M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more