[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 17,366 items for (author: ru & h)

EMDB-45969:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45971:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-45972:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwp:
Local refinement of the SARS-CoV-2 BA.2.86 RBD in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwq:
Local refinement of the SARS-CoV-2 BA.2.86 NTD
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9cwr:
SARS-CoV-2 BA.2.86 Spike trimer in complex with TRI2-2 minibinder
Method: single particle / : Lee J, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-70159:
Cryo-EM structure of SHOC2-KRAS-PP1CA (SKP) complex
Method: single particle / : Finci LI, Bonsor DA, Simanshu DK

PDB-9o65:
Cryo-EM structure of SHOC2-KRAS-PP1CA (SKP) complex
Method: single particle / : Finci LI, Bonsor DA, Simanshu DK

EMDB-47205:
consensus map of attPmm and attBmm bound serine integrase complex in the pre-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47206:
Focused map of attPmm and attBmm bound serine integrase complex
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47220:
Consensus map of attPmm and attBmm bound serine integrase complex in the post-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47284:
attLmm bound serine integrase and RDF complex in the pre-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47286:
attLmm bound serine integrase and RDF complex in the post-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47287:
attP bound large serine integrase and RDF complex in the dimeric state (cleaved)
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47288:
attPmm and attBmm bound serine integrase complex in the pre-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47289:
attPmm and attBmm bound serine integrase complex in the post-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-47290:
attPmm bound serine integrase complex in the tetrameric state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxd:
attLmm bound serine integrase and RDF complex in the pre-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxf:
attLmm bound serine integrase and RDF complex in the post-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxg:
attP bound large serine integrase and RDF complex in the dimeric state (cleaved)
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxh:
attPmm and attBmm bound serine integrase complex in the pre-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxj:
attPmm and attBmm bound serine integrase complex in the post-rotation state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

PDB-9dxk:
attPmm bound serine integrase complex in the tetrameric state
Method: single particle / : Shin H, Rice PA, Olorunniji FJ

EMDB-44633:
Cryo-EM structure of apo NVL
Method: single particle / : Cruz VE, Erzberger JP

EMDB-44634:
Cryo-EM structure of NVL bound the the MM017 inhibitor
Method: single particle / : Cruz VE, Erzberger JP

EMDB-72372:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-trimer map 4)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72373:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 1)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72374:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 2)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72375:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 3)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-65138:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 1)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

EMDB-65139:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 2)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

EMDB-65140:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 3)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

EMDB-65141:
Cryo-EM structure of F-ATP synthase c-ring from Mycobacteroides abscessus (Backbone)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

PDB-9vkp:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 1)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

PDB-9vkq:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 2)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

PDB-9vkr:
Cryo-EM structure of F-ATP synthase from Mycobacteroides abscessus (Rotational State 3)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

PDB-9vks:
Cryo-EM structure of F-ATP synthase c-ring from Mycobacteroides abscessus (Backbone)
Method: single particle / : Fong TC, Saw WG, Mathiyazakan V, Wong CF, Grueber G

EMDB-49057:
Dimeric structure of GM4951
Method: single particle / : Raj R, Beutler B

PDB-9n6d:
Dimeric structure of GM4951
Method: single particle / : Raj R, Beutler B

EMDB-54832:
Cryo-EM map of influenza hemagglutinin (A/Hong Kong/1/1968, H3N2) jetted control sample
Method: single particle / : Williams HM, Curtis WA, Haubner M, Hruby J, Drabbels M, Lorenz UJ

EMDB-48430:
SPA of purified HIV-1 CA protein in vitro assembled with IP6 (mature morphology). 50 uM LEN was added post assembly.
Method: single particle / : Ricana CL, Dick RA

EMDB-71123:
CD73-Sym024 focused map 1
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71125:
CD73-Sym024 consensus map
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71126:
CD73_Sym024 focused map 2
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71127:
CD73-Sym024 focused map 3
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71244:
The consensus map of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71245:
The open state of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71246:
Zebrafish TRPM5 with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71247:
Zebrafish TRPM5 with 0.2mM calcium
Method: single particle / : Ruan Z, Du J, Lu W, Li Y

EMDB-71248:
Zebrafish TRPM5 with 1uM calcium
Method: single particle / : Ruan Z, Du J, Lu W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more