[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,628 items for (author: rao & g)

EMDB-67658:
DPR epimerase complex, DLM-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

PDB-21gq:
DPR epimerase complex, DLM-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

EMDB-67660:
DPR epimerase complex, substrate-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

PDB-21gt:
DPR epimerase complex, substrate-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

EMDB-67659:
DPR epimerase complex, PMD-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

PDB-21gr:
DPR epimerase complex, PMD-bound state
Method: single particle / : Wu F, Gao S, Rao Z, Zhang L

EMDB-56520:
Cryo-EM map of SKM-70S complex State 2 (Accommodating A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56525:
Cryo-EM map of SKM-70S complex State 4 (Accommodated A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56530:
Cryo-EM map of SKM-70S complex State 6 (Empty, canonical)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-57122:
Cryo-EM map of SKM-70S complex State 7 (Empty, rotated)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-80088:
receptor-arrestin
Method: single particle / : Fei X, Zhibin Z

PDB-25gn:
receptor-arrestin
Method: single particle / : Fei X, Zhibin Z

EMDB-59227:
Cryo-EM map of SKM-M. smegmatis 70S complex State M1 (P-tRNA, vacant A-site)
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-59228:
Cryo-EM map of SKM-M. smegmatis 70S complex State M2 (P-tRNA, A-tRNA, Body open)
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-59229:
Cryo-EM map of M. smegmatis 70S complex State M3 (P-tRNA, A-tRNA, Body closed)
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-59244:
Cryo-EM map of SKM-M. smegmatis 70S complex State M4 (P/E-tRNA, vacant A-site)
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-59252:
Cryo-EM map of SKM-M. smegmatis 70S complex State M5 (P/E-tRNA, A/P-tRNA)
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-80998:
Cryo-EM structure of human phosphorylate ATR-ATRIP complex with ATPgammaS
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-26zn:
Cryo-EM structure of human phosphorylate ATR-ATRIP complex with ATPgammaS
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68913:
Cryo-EM structure of human ATR-ATRIP complex with Berzosertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68914:
Cryo-EM structure of human ATR-ATRIP complex with Ceralasertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68915:
Cryo-EM structure of human ATR-ATRIP complex with Elimusertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68917:
Cryo-EM structure of human ATR-ATRIP complex with Gartisertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68918:
Cryo-EM structure of human ATR-ATRIP complex with ATPgammaS
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-68920:
Cryo-EM structure of human ATR-ATRIP complex with ATPgammaS, Chk1 and TopBp1
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23ew:
Cryo-EM structure of human ATR-ATRIP complex with Berzosertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23ex:
Cryo-EM structure of human ATR-ATRIP complex with Ceralasertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23ey:
Cryo-EM structure of human ATR-ATRIP complex with Elimusertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23fa:
Cryo-EM structure of human ATR-ATRIP complex with Gartisertib
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23fb:
Cryo-EM structure of human ATR-ATRIP complex with ATPgammaS
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

PDB-23fd:
Cryo-EM structure of human ATR-ATRIP complex with ATPgammaS, Chk1 and TopBp1
Method: single particle / : Wang L, Wang M, Zhao L, Rao Q, Wu H, Ma B, Wang J, Zheng J, Li Y, Xu Y, Guo J, Cheng J, Qiao S

EMDB-65624:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in the prefusion state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

PDB-9w4c:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in the prefusion state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

EMDB-59026:
Cryo-EM structure of SKM-M.smegmatis 70S ribosomal complex
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

PDB-32nj:
Cryo-EM structure of SKM-M.smegmatis 70S ribosomal complex
Method: single particle / : Cook MA, Xu M, Morici M, Travin DT, Wang W, Klepacki D, Nandini N, Rao VN, Sahile H, Hackenberger D, Golas AJ, Nietupski RM, Fitzgerald M, Safdari HA, Berger M, Corazza M, Bond A, Ben-Zion I, Guitor AK, Tertigas D, Wang L, Schaenzer AJ, Ejim L, Yarlagadda V, Gomez J, Surette MG, Av-Gay Y, Dhar N, Hung DT, Vazquez Laslop N, Mankin A, Wilson DN, Wright GD

EMDB-71844:
Structure of holo vanadium-dependent haloperoxidase from Enhygromyxa salina bound to vanadate, and bromide
Method: single particle / : Loerch S, Baumgartner JT, Balasco Serrao VH, McKinnie SMK

EMDB-71845:
Structure of vanadium-dependent haloperoxidase from Enhygromyxa salina bound to vanadate, bromide, and hydrogen peroxide
Method: single particle / : Loerch S, Baumgartner JT, Balasco Serrao VH, McKinnie SMK

PDB-9ptr:
Structure of holo vanadium-dependent haloperoxidase from Enhygromyxa salina bound to vanadate, and bromide
Method: single particle / : Loerch S, Baumgartner JT, Balasco Serrao VH, McKinnie SMK

PDB-9pts:
Structure of vanadium-dependent haloperoxidase from Enhygromyxa salina bound to vanadate, bromide, and hydrogen peroxide
Method: single particle / : Loerch S, Baumgartner JT, Balasco Serrao VH, McKinnie SMK

EMDB-65625:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in the postfusion state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

PDB-9w4d:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in the postfusion state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

EMDB-65626:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in an early fusion intermediate state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

PDB-9w4e:
Fusion protein of Helicoverpa armigera nucleopolyhedrovirus in an early fusion intermediate state
Method: single particle / : Chong T, Rao G, Fu Y, Cao S

EMDB-80447:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus L protein (apo form)
Method: single particle / : Jia H, Liu S, Gong P

EMDB-80448:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus L protein (5'-cRNA-bound form)
Method: single particle / : Jia H, Liu S, Gong P

EMDB-80449:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus full-length L protein RdRP elongation complex (EC14 form)
Method: single particle / : Jia H, Tang B, Gong P

EMDB-80450:
Cryo-EM structure of the Crimean-Congo hemorrhagic fever virus full-length L protein RdRP elongation complex (EC14b form)
Method: single particle / : Jia H, Tang B, Gong P

EMDB-66504:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66505:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

EMDB-66506:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more