[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 338 items for (author: qiao & r)

EMDB-37139:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37143:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37144:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37145:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37160:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37161:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37162:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37163:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37164:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37165:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdm:
Structure of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdr:
The local refined map of SARS-CoV-2 XBB Variant Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kds:
Trimer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kdt:
The local refined map of SARS-CoV Spike protein complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kej:
Monomer state of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kek:
Monomer state of SARS-CoV Spike protein complexed with antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keo:
Structure of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8kep:
The local refined map of SARS-CoV-2 Omicron BA.1 Spike complexed with antibody PW5-570
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8keq:
State 1 of SARS-CoV-2 XBB Variant Spike protein trimer complexed with antibody PW5-5
Method: single particle / : Sun L, Mao Q, Wang Y

PDB-8ker:
Structure of SARS-CoV-2 XBB Variant Spike protein complexed with broadly neutralizing antibody PW5-535
Method: single particle / : Sun L, Mao Q, Wang Y

EMDB-37467:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37468:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37469:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37470:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

EMDB-37471:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304
Method: single particle / : Li W, Xie Y

PDB-8wdy:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8wdz:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we0:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we1:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2
Method: single particle / : Li W, Xie Y

PDB-8we4:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304
Method: single particle / : Li W, Xie Y

EMDB-43736:
Umb1 umbrella toxin particle
Method: single particle / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

EMDB-43737:
Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1)
Method: single particle / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

PDB-8w20:
Umb1 umbrella toxin particle
Method: single particle / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

PDB-8w22:
Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1)
Method: single particle / : Park YJ, Zhao Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio F, Mougous JD, Veesler D

EMDB-35416:
Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe
Method: single particle / : Zhang HQ, Wang X, Wang YN, Liu SM, Zhang Y, Xu K, Ji LT, Kornberg RD

PDB-8ifg:
Cryo-EM structure of the Clr6S (Clr6-HDAC) complex from S. pombe
Method: single particle / : Zhang HQ, Wang X, Wang YN, Liu SM, Zhang Y, Xu K, Ji LT, Kornberg RD

EMDB-35417:
Clr6 HDAC (Clr6S)-nucleosome complex
Method: single particle / : Zhang HQ

EMDB-36278:
Rpd3S-nucleosome (H3K36me3 modified)
Method: single particle / : Wang X, Wang YN, Liu SM, Zhang Y, Xu K, Ji LT, Kornberg RD, Zhang HQ

EMDB-35063:
The complex structure of Omicron BA.4 RBD with BD604, S309, and S304
Method: single particle / : He QW, Xu ZP, Xie YF

EMDB-35064:
SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
Method: single particle / : He QW, Xie Y

PDB-8hws:
The complex structure of Omicron BA.4 RBD with BD604, S309, and S304
Method: single particle / : He QW, Xu ZP, Xie YF

PDB-8hwt:
SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
Method: single particle / : He QW, Xie Y

EMDB-40567:
Structure of human SIgA1 in complex with human CD89 (FcaR1)
Method: single particle / : Liu Q, Stadtmueller BM

EMDB-40568:
Structure of human SIgA1 in complex with Streptococcus pyogenes protein M4 (Arp4)
Method: single particle / : Liu Q, Stadtmueller BM

PDB-8sku:
Structure of human SIgA1 in complex with human CD89 (FcaR1)
Method: single particle / : Liu Q, Stadtmueller BM

PDB-8skv:
Structure of human SIgA1 in complex with Streptococcus pyogenes protein M4 (Arp4)
Method: single particle / : Liu Q, Stadtmueller BM

EMDB-36748:
Structure of a fungal 1,3-beta-glucan synthase
Method: single particle / : Zhao C, You Z, Chen D, Hang J, Wang Z, Meng J, Wang L, Zhao P, Qiao J, Yun C, Bai L

PDB-8jzn:
Structure of a fungal 1,3-beta-glucan synthase
Method: single particle / : Zhao C, You Z, Chen D, Hang J, Wang Z, Meng J, Wang L, Zhao P, Qiao J, Yun C, Bai L

EMDB-34522:
Cryo-EM Structure of SARS-CoV-2 BA.2 Spike protein in complex with BA7535
Method: single particle / : Liu Z, Yan A, Gao Y

EMDB-34526:
Cryo-EM structure of SARS-CoV-2 BA.2 RBD in complex with BA7535 fab (local refinement)
Method: single particle / : Liu Z, Yan A, Gao Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more