[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 39 items for (author: pieri & l)

EMDB-42779:
Cryo-EM structure of a bacterial nitrilase filament with a covalent adduct derived from benzonitrile hydrolysis

PDB-8uxu:
Cryo-EM structure of a bacterial nitrilase filament with a covalent adduct derived from benzonitrile hydrolysis

EMDB-17993:
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex

PDB-8pwh:
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex

EMDB-18188:
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex

PDB-8q6j:
Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex

EMDB-18189:
Cryo-EM map of the pertuzumab-HER2 complex obtained from local refinement of the HER2-pertuzumab-trastuzumab ternary complex

EMDB-18190:
Cryo-EM map of the trastuzumab-HER2 complex obtained from local refinement of the HER2-pertuzumab-trastuzumab ternary complex

EMDB-29744:
local refinement of the primase/DNA/primer region in mutant T4 primosome

EMDB-27707:
Close state of T4 bacteriophage gp41 hexamer bound with single strand DNA

EMDB-27708:
Closed conformation of bacteriophage T4 helicase hexamer with single strand DNA but no primase added.

EMDB-27719:
Open state of T4 bacteriophage gp41 hexamer bound with single strand DNA

EMDB-27720:
Open coformation of bacteriophage T4 helicase hexamer around single strand DNA without primase added

EMDB-27724:
DNA-free T4 Bacteriophage gp41 hexamer

EMDB-27737:
T4 Bacteriophage primosome with single strand DNA, state 1

EMDB-27739:
T4 bacteriophage primosome with single strand DNA, State 2

EMDB-27751:
T4 bacteriophage primosome with single-strand DNA, State 3

EMDB-27756:
Primase of mutant bacteriophage T4 primosome with single strand DNA/RNA primer hybrid in primer exiting state

EMDB-29658:
Mutant bacteriophage T4 gp41 helicase hexamer bound with single strand DNA and ATPgammaS in the stalled primosome

PDB-8dtp:
Close state of T4 bacteriophage gp41 hexamer bound with single strand DNA

PDB-8due:
Open state of T4 bacteriophage gp41 hexamer bound with single strand DNA

PDB-8duo:
DNA-free T4 Bacteriophage gp41 hexamer

PDB-8dvf:
T4 Bacteriophage primosome with single strand DNA, state 1

PDB-8dvi:
T4 bacteriophage primosome with single strand DNA, State 2

PDB-8dw6:
T4 bacteriophage primosome with single-strand DNA, State 3

PDB-8dwj:
Primase of mutant bacteriophage T4 primosome with single strand DNA/RNA primer hybrid in primer exiting state

PDB-8g0z:
Mutant bacteriophage T4 gp41 helicase hexamer bound with single strand DNA and ATPgammaS in the stalled primosome

EMDB-29902:
bacteriophage T4 stalled primosome with mutant gp41-E227Q

PDB-8gao:
bacteriophage T4 stalled primosome with mutant gp41-E227Q

EMDB-25787:
C2-symmetric single-particle cryo-EM map of T. vaginalis FDPF3

EMDB-25790:
C1-symmetric single-particle cryo-EM map of T. vaginalis FDPF3

EMDB-13830:
Lanreotide nanotube

PDB-7q5a:
Lanreotide nanotube

EMDB-13095:
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg

PDB-7ow8:
CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg

EMDB-12170:
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM

PDB-7bg4:
Multidrug resistance transporter BmrA mutant E504A bound with ATP, Mg, and Rhodamine 6G solved by Cryo-EM

EMDB-4749:
Multidrug resistance transporter BmrA mutant E504A bound with ATP and Mg solved by Cryo-EM

PDB-6r81:
Multidrug resistance transporter BmrA mutant E504A bound with ATP and Mg solved by Cryo-EM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more