[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,715 items for (author: paul & m)

EMDB-73275:
Cryo-EM structure of a preformed dimer of the C. elegans EGFR (LET-23) extracellular region
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73276:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73277:
Cryo-EM structure of an inactive dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3.
Method: single particle / : Zuo Y, Han L, Ferguson KM

EMDB-73278:
Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

EMDB-73279:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion bound to LIN-3.
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

PDB-9yor:
Cryo-EM structure of a preformed dimer of the C. elegans EGFR (LET-23) extracellular region
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9yos:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9yot:
Cryo-EM structure of an inactive dimer of the C. elegans EGFR (LET-23) extracellular region bound to LIN-3.
Method: single particle / : Zuo Y, Han L, Ferguson KM

PDB-9you:
Cryo-EM structure of a weak dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

PDB-9yov:
Cryo-EM structure of an active dimer of the C. elegans EGFR (LET-23) extracellular region with a domain IV loop deletion bound to LIN-3.
Method: single particle / : Zuo Y, Walker K, Han L, Ferguson KM

EMDB-57364:
RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57390:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57401:
RNA polymerase II pre-initiation complex bound to ADP-BeF3 in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

EMDB-57691:
TFIID-containing RNA polymerase II pre-initiation complex in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

EMDB-57693:
RNA polymerase II initially transcribing complex with a 6-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

PDB-29tk:
RNA polymerase II elongation complex with the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-29vf:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-29wd:
RNA polymerase II initially transcribing complex with a 2-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Dienemann C, Cramer P

PDB-30ff:
TFIID-containing RNA polymerase II pre-initiation complex in the presence of the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

PDB-30fh:
RNA polymerase II initially transcribing complex with a 6-nt RNA and the +1 nucleosome
Method: single particle / : Zhan Y, Abril-Garrido J, Grabbe F, Seweryn P, Neef U, Dienemann C, Cramer P

EMDB-71716:
Sub-tomogram average of thick flagellar filament of T. denticola
Method: subtomogram averaging / : Paul B, Troman LA, Ghosal D

EMDB-71717:
Sub-tomogram average of thin flagellar filament from T. denticola
Method: helical / : Paul B, Troman LA, Ghosal D

EMDB-71671:
Thin Flagellar Filament from T. denticola
Method: helical / : Troman LA, Paul B, Ghosal D

PDB-9pil:
Thin Flagellar Filament from T. denticola
Method: helical / : Troman LA, Paul B, Ghosal D

EMDB-71672:
Outer Curvature of Thick Flagellar Filament from T.denticola
Method: helical / : Troman LA, Paul B, Ghosal D

EMDB-71673:
Inner Curvature of Thick Flagellar Filament from T.denticola
Method: helical / : Troman LA, Paul B, Ghosal D

PDB-9pim:
Outer Curvature of Thick Flagellar Filament from T.denticola
Method: helical / : Troman LA, Paul B, Ghosal D

PDB-9pin:
Inner Curvature of Thick Flagellar Filament from T.denticola
Method: helical / : Troman LA, Paul B, Ghosal D

EMDB-72190:
Cryo-EM structure of RotavirusA NSP1-ELOB-ELOC-CUL3
Method: single particle / : Baek K, Glassman CR, Fischer ES

PDB-9q3e:
Cryo-EM structure of RotavirusA NSP1-ELOB-ELOC-CUL3
Method: single particle / : Baek K, Glassman CR, Fischer ES

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-54825:
Heterodisulfide reductase-Formylmethanofuran dehydrogenase super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-54996:
Consensus map of the eight- megadalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-54997:
Local refinement of VhuB from the eight-megadalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-54998:
Local refinement of VhuB from the eight-megadalton Hdr-Vhu-Fwd super-assembly, state 2
Method: single particle / : Paul S, Schuller JM

EMDB-54999:
Local Refinement of the HdrABC-dimer from the eight-megadalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-55009:
Local refinement of FwdF from the eight-megadalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-55010:
Local refinement of the outer FwdABCDG-complex from the eight-megadalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-55423:
Local refinement of the inner region of FwdABCDG from the eight mega-dalton Hdr-Vhu-Fwd super-assembly
Method: single particle / : Paul S, Schuller JM

EMDB-55424:
Local refinement map of the Vhu hydrogenase of the Hdr-Vhu-Fdh complex
Method: single particle / : Paul S, Schuller JM

EMDB-55426:
Local refinement map of the formate dehydrogenase of the Hdr-Vhu-Fdh complex
Method: single particle / : Paul S, Schuller JM

EMDB-55451:
Composite map of the Hdr-Vhu-Fdh dimer
Method: single particle / : Paul S, Schuller JM

PDB-9sfi:
Heterodisulfide reductase-Formylmethanofuran dehydrogenase super-assembly
Method: single particle / : Paul S, Schuller JM

PDB-9t1s:
Heterodisulfide-Hydrogenase-Formate Dehydrogenase dimer
Method: single particle / : Paul S, Schuller JM

EMDB-55048:
CryoEM structure of NADH:quinone oxidoreductases YjlCD from Bacillus subtilis
Method: single particle / : Osman R, Cherrier MV, Nicolet Y, Juyoux P, Schoehn G, Seduk F, Garcia PS, Bizien-Jaglin L, Botte CY, Kosta A, Lebrun R, Mate MJ, Pierrel F, Yamaryo-Botte Y, Walburger A, Magalon A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more